Reorganization of the repo, update dependencies, modified complexipy and more

.github/actions/lint-code/action.yml

@@ -38,7 +38,7 @@ runs:
       shell: bash
       run: |
         echo "Running Complexipy..."
-        uv run complexipy -d low "${{ inputs.src-project-folder }}/"
+        uv run complexipy -f "${{ inputs.src-project-folder }}/"
 
     - name: Check Type Hints with Mypy
       shell: bash

.gitignore

@@ -15,6 +15,7 @@ __pycache__/
 ./examples/illia_all_backend_all_modules_pytests.ipynb
 *.egg-info/
 /docs/examples/Computer Vision/data*
+.complexipy_cache/
 
 # Files
 *.txt

Makefile

@@ -38,7 +38,7 @@ lint:
 # Static analysis checks
 code_check:
 	@echo "Running static code checks..."
-	@uv run complexipy -d low $(SRC_PROJECT_NAME)/
+	@uv run complexipy -f $(SRC_PROJECT_NAME)/
 	@uv run mypy $(SRC_PROJECT_NAME)/
 	@uv run bandit -r $(SRC_PROJECT_NAME)/ --exclude tests/
 	@echo "✅ Code checks complete."

pyproject.toml

@@ -68,17 +68,17 @@ pyg = [
 
 [dependency-groups]
 pipeline = [
-    "black==25.9.0",
+    "black==25.12.0",
     "black[jupyter]",
-    "complexipy==4.2.0",
+    "complexipy==5.1.0",
     "flake8==7.3.0",
     "Flake8-pyproject==1.2.3",
     "isort==7.0.0",
     "nox==2025.11.12",
     "pylint==4.0.4",
     "pytest-order==1.3.0",
     "mypy==1.19.0",
-    "pytest==9.0.1",
+    "pytest==9.0.2",
     "bandit==1.9.2",
 ]
 documentation = [
@@ -89,7 +89,7 @@ documentation = [
     "mkdocs-git-authors-plugin==0.10.0",
     "mkdocs-enumerate-headings-plugin==0.6.2",
     "mkdocs-jupyter==0.25.1",
-    "mkdocs-awesome-nav==3.2.0",
+    "mkdocs-awesome-nav==3.3.0",
     "mike==2.1.3",
 ]
 examples = [