Merge remote-tracking branch 'cgal/master' into Hyperbolic_surface_tr…

…iangulation_2-dubois

.devcontainer/doxygen-cgal/Dockerfile

@@ -0,0 +1,55 @@
+# Use an official Fedora as a parent image for the build stage
+FROM fedora:latest AS sources_deps
+
+# Set environment variables to non-interactive
+ENV DEBIAN_FRONTEND=noninteractive
+
+# Install dependencies
+RUN dnf update -y && dnf install -y \
+    wget \
+    make \
+    gcc \
+    gcc-c++ \
+    patch \
+    cmake \
+    bison \
+    flex \
+    unzip \
+    python3 \
+    && dnf clean all
+
+# Copy the patch file to the build context
+COPY cgal-NO_ADDITIONAL_DETAILS.patch .
+
+FROM sources_deps AS build
+
+# Build and install Doxygen from sources
+ARG DOXYGEN_VERSION=1.9.6
+ARG MAKEFLAGS=-j$(nproc)
+RUN if [ -n "$DEBUG"];then set -x && make --version && ls -lZ /tmp && id; fi \
+    && DOXYGEN_VERSION_UNDERSCORE=$(echo ${DOXYGEN_VERSION} | sed 's/\./_/g') \
+    && wget https://github.com/doxygen/doxygen/archive/refs/tags/Release_${DOXYGEN_VERSION_UNDERSCORE}.zip \
+    && unzip Release_${DOXYGEN_VERSION_UNDERSCORE}.zip \
+    && cd doxygen-Release_${DOXYGEN_VERSION_UNDERSCORE} \
+    && patch -p1 < ../cgal-NO_ADDITIONAL_DETAILS.patch \
+    && mkdir build \
+    && cd build \
+    && cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE=Release .. \
+    && cmake --build . \
+    && cmake --install . \
+    && mkdir -p /usr/local/share/doc/doxygen && cp ../LICENSE /usr/local/share/doc/doxygen/LICENSE.TXT \
+    && cd ../.. \
+    && rm -rf doxygen-Release_${DOXYGEN_VERSION_UNDERSCORE} Release_${DOXYGEN_VERSION_UNDERSCORE}.zip
+
+# Use a smaller base image for the final stage
+FROM fedora:latest
+
+# Install necessary runtime dependencies
+RUN set -x \
+    && dnf update -y && dnf install -y graphviz 'perl(Getopt::Std)' tex-bibtex cmake python3-lxml python3-pyquery \
+    && dnf clean all
+
+# Copy Doxygen from the build stage
+COPY --from=build /usr/local/bin/doxygen /usr/local/bin
+COPY --from=build /usr/local/share/doc/doxygen/LICENSE.TXT /usr/local/share/doc/doxygen/LICENSE.TXT
+RUN doxygen --version

.devcontainer/doxygen-cgal/Makefile

@@ -0,0 +1,23 @@
+SHELL := /bin/bash
+DOXYGEN_VERSIONS := 1.12.0 1.11.0 1.10.0 1.9.8 1.9.7 1.9.6
+
+.PHONY: all build-% push-% build push
+
+all: build
+	@echo "Use `$(MAKE) push` to push the images to the registry."
+
+build-%:
+	@echo "MAKEFLAGS: $(MAKEFLAGS)"
+	@echo "Building Doxygen version $*..."
+	if [ "$$(getenforce || true)" == "Enforcing" ]; then Z=:z; else Z=; fi; \
+	F="$(MAKEFLAGS)"; F=$${F##*fifo:}; F=$${F%% *}; \
+	if [ -p "$$F" ]; then echo "The GNU make FIFO file exists:"; ls -l $$F; VOLUME_ARGS="-v $$F:$$F$$Z"; echo -- $$VOLUME_ARGS; fi; \
+	podman build --build-arg DOXYGEN_VERSION=$* --build-arg "MAKEFLAGS=$(MAKEFLAGS)" $$VOLUME_ARGS -t cgal/doxygen:$* .
+
+push-%: build-%
+	@echo "Pushing cgal/doxygen:$*..."
+	podman push cgal/doxygen:$*
+
+build: $(foreach version,$(DOXYGEN_VERSIONS),build-$(version))
+
+push: $(foreach version,$(DOXYGEN_VERSIONS),push-$(version))

.devcontainer/doxygen-cgal/cgal-NO_ADDITIONAL_DETAILS.patch

@@ -0,0 +1,44 @@
+diff --git a/src/config.xml b/src/config.xml
+index 13910958a6..31f1354e44 100644
+--- a/src/config.xml
++++ b/src/config.xml
+@@ -893,6 +893,18 @@ Go to the <a href="commands.html">next</a> section or return to the
+  \note This will also disable the warnings about undocumented members
+  that are normally produced when \ref cfg_warnings "WARNINGS" is
+  set to \c YES.
++]]>
++      </docs>
++    </option>
++  </group>
++  <group name='Build' docs='Build related configuration options'>
++    <option type='bool' id='NO_ADDITIONAL_DETAILS' defval='0'>
++      <docs>
++<![CDATA[
++ When the \c EXTRACT_ALL tag is set to \c YES and a member or class
++ as no documentation, no detailed section will be produced if
++ the \c NO_ADDITIONAL_DETAILS tag is set to \c YES.
++ This tag has no effect if the \c EXTRACT_ALL tag is set to \c NO.
+ ]]>
+       </docs>
+     </option>
+diff --git a/src/memberdef.cpp b/src/memberdef.cpp
+index 08d9bf24c5..ab04e994c5 100644
+--- a/src/memberdef.cpp
++++ b/src/memberdef.cpp
+@@ -2501,6 +2501,7 @@ bool MemberDefImpl::hasDetailedDescription() const
+   if (!m_hasDetailedDescriptionCached)
+   {
+     bool extractAll            = Config_getBool(EXTRACT_ALL);
++    bool xAllNoDetailedSec = Config_getBool(NO_ADDITIONAL_DETAILS);
+     bool alwaysDetailedSec     = Config_getBool(ALWAYS_DETAILED_SEC);
+     bool repeatBrief           = Config_getBool(REPEAT_BRIEF);
+     bool briefMemberDesc       = Config_getBool(BRIEF_MEMBER_DESC);
+@@ -2512,7 +2513,7 @@ bool MemberDefImpl::hasDetailedDescription() const
+     // the member has detailed documentation because the user added some comments
+     bool docFilter =
+            // extract all is enabled
+-           extractAll ||
++           (extractAll && !xAllNoDetailedSec) ||
+            // has detailed docs
+            !documentation().isEmpty() ||
+            // has inbody docs

.devcontainer/doxygen-cgal/devcontainer.json

@@ -0,0 +1,16 @@
+{
+    "name": "CGAL Doxygen Dev Container, version 1.12.0, with CGAL patch",
+    "image": "docker.io/cgal/doxygen:1.12.0",
+    "features": {
+        "ghcr.io/devcontainers/features/git:1.3.2": {}
+    },
+    "customizations": {
+        "vscode": {
+            "extensions": [
+                "ms-vscode.cmake-tools",
+                "bbenoist.Doxygen",
+                "ms-vscode.cpptools"
+            ]
+        }
+    },
+}

.devcontainer/doxygen-cgal/distrobox.ini

@@ -0,0 +1,29 @@
+[distrobox-doxygen-1.12.0]
+image=cgal/doxygen:1.12.0
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.12.0
+
+[distrobox-doxygen-1.11.0]
+image=cgal/doxygen:1.11.0
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.11.0
+
+[distrobox-doxygen-1.10.0]
+image=cgal/doxygen:1.10.0
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.10.0
+
+[distrobox-doxygen-1.9.8]
+image=cgal/doxygen:1.9.8
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.9.8
+
+[distrobox-doxygen-1.9.7]
+image=cgal/doxygen:1.9.7
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.9.7
+
+[distrobox-doxygen-1.9.6]
+image=cgal/doxygen:1.9.6
+exported_bins="/usr/local/bin/doxygen /usr/bin/perl /usr/bin/cmake /usr/bin/python3"
+exported_bins_path=$HOME/.local/bin-doxygen-1.9.6

.gitattributes

@@ -58,7 +58,6 @@ Scripts/developer_scripts/check_svn_keywords text eol=lf
 Scripts/developer_scripts/create_cgal_test text eol=lf
 Scripts/developer_scripts/create_cgal_test_with_cmake text eol=lf
 Scripts/developer_scripts/create_internal_release text eol=lf
-Scripts/developer_scripts/create_macosx_installer text eol=lf
 Scripts/developer_scripts/create_new_release text eol=lf
 Scripts/developer_scripts/detect_files_with_mixed_eol_styles text eol=lf
 Scripts/developer_scripts/detect_packages_licenses text eol=lf

.github/ISSUE_TEMPLATE.md → .github/ISSUE_TEMPLATE/ISSUE_TEMPLATE.md

@@ -1,3 +1,11 @@
+---
+name: Issue
+about: Use this template for reporting issues with CGAL
+title: ''
+labels: ''
+assignees: ''
+---
+
 _Please use the following template to help us solving your issue._
 
 ## Issue Details

.github/ISSUE_TEMPLATE/config.yml

@@ -0,0 +1 @@
+blank_issues_enabled: false