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Getting started instructions

Status: Open.

#38 In CDCgov/cladecombiner;

· afmagee42 opened on Mar 6, 2025

Revisit code organization

Status: Open.

#36 In CDCgov/cladecombiner;

· afmagee42 opened on Feb 5, 2025

Refactor <code>BasicPhylogeneticAggregator</code>

Status: Open.

#35 In CDCgov/cladecombiner;

· afmagee42 opened on Feb 3, 2025

Aggregation without specifying is_tip for each target taxa

Status: Open.

#31 In CDCgov/cladecombiner;

· sam-baird opened on Dec 3, 2024

Saving the "executable" not just the mapping

Status: Open.

#30 In CDCgov/cladecombiner;

· afmagee42 opened on Nov 22, 2024

Access to mutational information?

Status: Open.

#28 In CDCgov/cladecombiner;

· afmagee42 opened on Nov 21, 2024

Writing trees with ancestral taxa and data labels

Status: Open.

#26 In CDCgov/cladecombiner;

· afmagee42 opened on Nov 21, 2024

Aggregations should store version information on the alias list

Status: Open.

#25 In CDCgov/cladecombiner;

· afmagee42 opened on Nov 21, 2024

Recombinants and forests

Status: Open.

#17 In CDCgov/cladecombiner;

· afmagee42 opened on Oct 17, 2024

<code>PangoSc2Nomenclature.taxonomy_tree()</code> breaks when trying to make tree for all Pango lineages

Status: Open.

#10 In CDCgov/cladecombiner;

· afmagee42 opened on Sep 11, 2024

Clarify name "coaxing" and "cleaning"

Status: Open.

#7 In CDCgov/cladecombiner;

· swo opened on Jun 25, 2024

Doing things more Pythonic

Status: Open.

#5 In CDCgov/cladecombiner;

· swo opened on Jun 25, 2024