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@CCRSF-IFX

CCRSF-IFX

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  1. SF_Polylox-BC SF_Polylox-BC Public

    Repository for Polylox barcoding extraction scripts

    Python 1 1

  2. SF_LR_VAP SF_LR_VAP Public

    SF Long Read Variant Analysis pipeline

    Python 1 1

  3. SF_ATAC-seq SF_ATAC-seq Public

    Python 1

  4. SF_LR_scRNA SF_LR_scRNA Public

    R 1

  5. SF_Fastq-QC SF_Fastq-QC Public

    Fastq QC pipeline for fast project delivery, also called "nopipe".

    Python 1

  6. SF_LR_Transcriptome SF_LR_Transcriptome Public

    Long read transcriptome pipeline for Pacbio and ONT

    Python 1

Repositories

Showing 10 of 13 repositories
  • SF_sc-smk-wl Public
    CCRSF-IFX/SF_sc-smk-wl’s past year of commit activity
    HTML 0 0 0 0 Updated Jan 3, 2025
  • SF_biocontainer Public
    CCRSF-IFX/SF_biocontainer’s past year of commit activity
    Dockerfile 0 1 0 0 Updated Dec 28, 2024
  • scMaestro Public

    scMaestro: end-to-end single-cell data analysis workflow with Snakemake and Singularity.

    CCRSF-IFX/scMaestro’s past year of commit activity
    Python 0 0 0 0 Updated Nov 13, 2024
  • SF_LR_scRNA Public
    CCRSF-IFX/SF_LR_scRNA’s past year of commit activity
    R 0 1 0 0 Updated Nov 5, 2024
  • SF_Downstream_RNA-seq Public

    RNA-Seq Downstream Differential Gene Expression and Gene Set Enrichment Analysis

    CCRSF-IFX/SF_Downstream_RNA-seq’s past year of commit activity
    R 0 MIT 1 0 0 Updated Oct 23, 2024
  • SF_LR_VAP Public

    SF Long Read Variant Analysis pipeline

    CCRSF-IFX/SF_LR_VAP’s past year of commit activity
    Python 1 MIT 1 0 0 Updated May 13, 2024
  • SF_LR_Transcriptome Public

    Long read transcriptome pipeline for Pacbio and ONT

    CCRSF-IFX/SF_LR_Transcriptome’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 13, 2024
  • SF_Fastq-QC Public

    Fastq QC pipeline for fast project delivery, also called "nopipe".

    CCRSF-IFX/SF_Fastq-QC’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 1, 2024
  • SF_Polylox-BC Public

    Repository for Polylox barcoding extraction scripts

    CCRSF-IFX/SF_Polylox-BC’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Apr 26, 2024
  • SF_LR_SOMATIC Public
    CCRSF-IFX/SF_LR_SOMATIC’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Apr 26, 2024
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