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[pull] develop from plantbreeding:brapi-server-v2 #36

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7d03141
Bump io.springfox:springfox-swagger-ui from 2.8.0 to 2.10.0
dependabot[bot] Aug 26, 2024
5be130e
Update README.md
BrapiCoordinatorSelby Oct 3, 2024
526d3cc
Solve dummy data migration issues
XoulKool Dec 4, 2024
0429883
Merge pull request #73 from plantbreeding/dependabot/maven/io.springf…
BrapiCoordinatorSelby Dec 4, 2024
b696a89
Merge pull request #74 from plantbreeding/update_properties_template
BrapiCoordinatorSelby Dec 4, 2024
7ae05eb
Scratch docker impl
jloux-brapi Dec 6, 2024
3511979
Create local containerized keycloak docker example, update README
jloux-brapi Dec 12, 2024
f1d8d35
Update README
jloux-brapi Dec 12, 2024
c72591e
Migrate javax to jakarta, ditch WebSecurityConfigurerAdapter
jloux-brapi Dec 13, 2024
8f23684
Java 21 Upgrade (First Pass)
jloux-brapi Dec 13, 2024
5306e44
Make default string type varchar(255) in DB, change init schema
jloux-brapi Dec 13, 2024
b3c3fa0
Reinstate v1 service for original compose, remove ports, remove volume
jloux-brapi Dec 14, 2024
5b044ec
Add note about DB IDs to README
jloux-brapi Dec 16, 2024
4019f1d
Merge branch 'keycloak-dev-docker' into java-21-upgrade
jloux-brapi Dec 16, 2024
303b265
Upgrade docker containers to latest postgres
jloux-brapi Dec 16, 2024
82588ed
Update prerequisites in README
jloux-brapi Dec 16, 2024
c37608c
Merge pull request #75 from plantbreeding/keycloak-dev-docker
jloux-brapi Dec 16, 2024
9eb49df
Merge pull request #76 from plantbreeding/java-21-upgrade
jloux-brapi Dec 16, 2024
30551b6
Add note on Docker volume paths to README
jloux-brapi Dec 17, 2024
b7dfb32
Merge pull request #77 from plantbreeding/readme-updates
BrapiCoordinatorSelby Dec 17, 2024
c5d7f52
update dummy variables
BrapiCoordinatorSelby Feb 6, 2025
ed16a94
Update pom.xml
AndreyJVM Feb 6, 2025
f2ffbc9
Merge pull request #78 from AndreyJVM/patch-1
BrapiCoordinatorSelby Feb 7, 2025
d397e51
fix paging bug
BrapiCoordinatorSelby Feb 18, 2025
d3b7964
updated variables
BrapiCoordinatorSelby Mar 4, 2025
e6f3714
updated variables
BrapiCoordinatorSelby Mar 4, 2025
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14 changes: 8 additions & 6 deletions Dockerfile
Original file line number Diff line number Diff line change
@@ -1,13 +1,15 @@
# build image : `docker build -t brapicoordinatorselby/brapi-java-server ./`
# run container (dev): `docker run --name=brapi-test-server --network=bridge -p 8081:8081 -d brapicoordinatorselby/brapi-java-server`
# run container (prod): `docker run --name=brapi-test-server --restart always --network=brapi_net -d brapicoordinatorselby/brapi-java-server`
# build image stack: `docker build -t docker-username/image-stack-name ./`
# run container (dev): `docker run --name=brapi-test-server --network=bridge -p 8081:8081 -d docker-username/image-stack-name`
# run container (prod): `docker run --name=brapi-test-server --restart always --network=brapi_net -d docker-username/image-stack-name`

FROM adoptopenjdk/openjdk8
FROM amazoncorretto:21

EXPOSE 8080
# 8080 - brapi app port | 5005 - brapi app debug port | 8008 - keycloak app port
EXPOSE 8080 5005 8008

RUN mkdir /home/brapi

COPY target/brapi-Java-TestServer-0.1.0.jar src/main/resources/ /home/brapi/

CMD java -cp "/home/brapi/:/home/brapi/brapi-Java-TestServer-0.1.0.jar" org.springframework.boot.loader.JarLauncher
# Open up debug port on JVM
CMD java -agentlib:jdwp=transport=dt_socket,server=y,suspend=n,address=0.0.0.0:5005 -cp "/home/brapi/:/home/brapi/brapi-Java-TestServer-0.1.0.jar" org.springframework.boot.loader.JarLauncher
279 changes: 272 additions & 7 deletions README.md

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21 changes: 21 additions & 0 deletions docker-compose-dev.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
services:
brapi-java-server-v2:
build:
context: .
dockerfile: Dockerfile
ports:
- "8080:8080"
- "5005:5005"
depends_on:
- brapi-db
volumes:
- .\src\main\resources\properties\application.properties:/home/brapi/properties/application.properties
brapi-db:
image: postgres:17.2
environment:
POSTGRES_USER: brapi
POSTGRES_PASSWORD: password
volumes:
- /var/lib/postgresql/data
ports:
- "5433:5432"
61 changes: 61 additions & 0 deletions docker-compose-local-auth.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,61 @@
services:
brapi-java-server-v2:
build:
context: .
dockerfile: Dockerfile
ports:
- "8080:8080"
- "5005:5005"
depends_on:
- brapi-db
volumes:
- .\src\main\resources\properties\application.properties:/home/brapi/properties/application.properties
keycloak-brapi:
image: quay.io/keycloak/keycloak:latest
entrypoint: /opt/keycloak/bin/kc.sh start-dev
depends_on:
- keycloak-db
environment:
- KEYCLOAK_USER=admin
- KEYCLOAK_PASSWORD=admin
# The KC_HOSTNAME needs to be the same as the defined keycloak-brapi service in the compose file for a local setup.
# This allows the brapi app to talk to the keycloak container via the service name in the url, and sets up keycloak
# url defaults so that when brapi gets auth urls from keycloak it can still talk to it.
- KC_HOSTNAME=keycloak-brapi
- KC_DB=postgres
- KC_DB_URL=jdbc:postgresql://keycloak-db:5432/keycloak
- KC_DB_SCHEMA=public
- KC_DB_USERNAME=keycloak
- KC_DB_PASSWORD=password
- KC_HOSTNAME_STRICT=false
- KC_HOSTNAME_STRICT_HTTPS=false
- KC_HTTP_PORT=8008

- KC_LOG_LEVEL=info
- KC_METRICS_ENABLED=true
- KC_HEALTH_ENABLED=true
- KEYCLOAK_ADMIN=admin
- KEYCLOAK_ADMIN_PASSWORD=admin
ports:
- "8008:8008"
brapi-db:
image: postgres:17.2
environment:
POSTGRES_USER: brapi
POSTGRES_PASSWORD: password
volumes:
- brapi-data:/var/lib/postgresql/data
ports:
- "5433:5432"
keycloak-db:
image: postgres:17.2
volumes:
- keycloak-data:/var/lib/postgresql/data
environment:
POSTGRES_USER: keycloak
POSTGRES_PASSWORD: password
ports:
- "5434:5432"
volumes:
keycloak-data:
brapi-data:
16 changes: 8 additions & 8 deletions docker-compose.yaml
Original file line number Diff line number Diff line change
@@ -1,27 +1,27 @@
version: '3'

services:
# Update this image with whatever image you have access to
brapi-java-server-v1:
image: brapicoordinatorselby/brapi-java-server:v1
restart: unless-stopped
depends_on:
- postgres
volumes:
- /home/jenkins/brapi.org/brapi-test-server/properties/v1/application.properties:/home/brapi/properties/application.properties
brapi-java-server-v2:
# Update this image with whatever image you have access to
image: brapicoordinatorselby/brapi-java-server:v2
restart: unless-stopped
depends_on:
- postgres
volumes:
# Update this path with the path your pipeline tool expects
- /home/jenkins/brapi.org/brapi-test-server/properties/v2/application.properties:/home/brapi/properties/application.properties
keycloak-brapi:
# Update this image with whatever keycloak image you have access to
image: brapicoordinatorselby/brapi-keycloak:latest
restart: unless-stopped
entrypoint: /opt/keycloak/bin/kc.sh start --optimized --proxy edge
depends_on:
- postgres
environment:
# These vars will change depending on how you have configured your keycloak DB
- KEYCLOAK_USER
- KEYCLOAK_PASSWORD
- KC_HOSTNAME=auth.brapi.org
Expand All @@ -30,10 +30,10 @@ services:
- KC_DB_USERNAME
- KC_DB_PASSWORD
postgres:
image: postgres:13
restart: unless-stopped
image: postgres:17.2
volumes:
- /home/jenkins/brapi.org/brapi-test-server/data:/var/lib/postgresql/data
# Update this path with the path your pipeline tool expects
- /home/jenkins/brapi.org/brapi-test-server/17-2:/var/lib/postgresql/data
networks:
default:
external:
Expand Down
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