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22 Open 97 Closed
22 Open 97 Closed
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Issues list

Handling Fungal Genomes in Mixed Metagenomic Datasets
#181 opened Dec 20, 2024 by PlantHealth-Analytics
1
KeyError of "calculate_coverage" in multi-sample binning
#180 opened Dec 3, 2024 by KageyamaTakuya
Multi-sample binning using fairy coverage
#179 opened Nov 29, 2024 by Louis-MG
1
Warnings when binning using long reads.
#175 opened Sep 5, 2024 by 123chenshixin
KeyError(f"None of [{key}] are in the [{axis_name}]") using aemb
#174 opened Aug 28, 2024 by michoug
3
Number of bins prior to reclustering: 0
#173 opened Aug 19, 2024 by yazhinia
1
Error: provided pretrained model only used in single-sample binning!
#172 opened Aug 14, 2024 by yazhinia
3
Large memory requirements (for very large binning jobs)
#171 opened Aug 12, 2024 by luispedro
Error: Running hmmsearch fail
#170 opened Aug 4, 2024 by StickHu
2
How to run "generate_sequence_features_single" with UNSORTED bam
#169 opened Jul 31, 2024 by GuoYang-qd
2
Question: Coverage not calculated for single_easy_bin with less than 5 .bam files
#167 opened Jul 24, 2024 by Sebastien-Raguideau
2
numpy.core._exceptions._ArrayMemoryError: Unable to allocate 2.86 TiB for an array with shape (886662, 886662) and data type float32
#165 opened Jun 10, 2024 by lfdelzam
Training step problem
#164 opened May 27, 2024 by heavennew
2
Error when running SemiBin2 (normalization?)
#159 opened Mar 8, 2024 by eperezv
6
Retain sample contig names during generate_sequence_features_multi
#152 opened Feb 15, 2024 by adityabandla
KeyError: '40075' Easy coassembly binning mode
#151 opened Feb 7, 2024 by gabrieleghiotto
2
SemiBin doesnt complete bining. Seems to be stuck
#150 opened Jan 24, 2024 by HitMonk
4
Empty test cases
#147 opened Nov 6, 2023 by Ralwoss
Database Download & Documentation
#141 opened Aug 29, 2023 by gbouras13
5
Semibin not respecting -p threads argument
#140 opened Aug 25, 2023 by AroneyS
1
Long_read problem
#138 opened Aug 1, 2023 by ZarulHanifah
1
Feature request: implement "circular aware" binning
#124 opened Dec 16, 2022 by luispedro
1
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