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Zoom to gene api added without examples#38

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anirban.fede.more-apis
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Zoom to gene api added without examples#38
federiva wants to merge 52 commits into
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anirban.fede.more-apis

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Using this WIP PR as base

Issue #

Changes description

Clearly and concisely describe what's in this pull request. Include screenshots, if necessary.

anirbanshaw24 and others added 16 commits October 28, 2022 13:49
…ode (#14)

* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* chore: Adding shinybusy as suggested package

* chore: reverting build

* chore: fix yarn

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* feat: export pdf api added

* feat: add export pdf api

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* feat: export pdf api added

* feat: add export pdf api

* fix: remove redundant gosling.js files. Remove shinybusy from examples.

* doc: add descriptions to params

* doc: add descriptions to params for visual channels

* doc: add docs to style props

* doc: remove empty examples from dicumentations

* doc: fix documentations

* doc: add author and maintainer

* fix: add js/node_modules to gitignore

* doc: fix Bioc package checks

* fix: Unmerged file

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* feat: export pdf api added

* feat: add export pdf api

* fix: remove redundant gosling.js files. Remove shinybusy from examples.

* doc: add descriptions to params

* doc: add descriptions to params for visual channels

* doc: add docs to style props

* doc: remove empty examples from dicumentations

* doc: fix documentations

* doc: add author and maintainer

* fix: add js/node_modules to gitignore

* doc: fix Bioc package checks

* feat: add brush use case to examples

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* feat: export pdf api added

* feat: add export pdf api

* fix: remove redundant gosling.js files. Remove shinybusy from examples.

* doc: add descriptions to params

* doc: add descriptions to params for visual channels

* doc: add docs to style props

* doc: remove empty examples from dicumentations

* doc: fix documentations

* doc: add author and maintainer

* fix: add js/node_modules to gitignore

* doc: fix Bioc package checks

* feat: add brush use case to examples

* fix: remove old examples

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
* feat: single track R functions added

* feat: add simple single track example

* fix: allow custom attributes in default_track_styles

* fix: add library in example

* fix: add to example

* feat: multi track plots

* fix: remove unwanted functions

* fix: allow atomic charater or numerical values

* fix: pass atomic constants in example

* doc: add help for add_single_track()

* feat: shiny reactivity

* featL add navbarpage to examples

* fix: reduce redundant code

* fix: Update multiTrackApp with shiny reactive plots

* fix: refactor shiny example

* fix: reduce code redundancy

* feat: css in example app

* feat: add wrapper for gosling plots

* Complete multitrack plot in example

* doc: add documentation

* fix: track3 data transform js error

* Updating renv (#13)

* fix: Updating renv

* fix: Added missing dependencies for example

* fix: reset zoom needs ids so added to gosling() function

* fix: remove static code from server.R and add shiny.fluent to library calls

* feat: gosling shiny components based in shiny.react

* doc: add roxygen skeleton to functions

* doc: devtools::document()

* fix: delete single track example; no longer needed

* feat: zoom to in single track example

* doc: add documentation in roxygen format

* fix: set webpack mode to dev AND remove buggy line of code customGosling.js

* fix: change pixi to version 6.3.0 according to https://github.com/gosling-lang/gosling.js/blob/master/package.json

* fix: higlass version 1.11.8

* fix: gosling.js version 0.9.25

* feat: export png feature added

* fix: remove browser

* feat: export pdf api added

* feat: add export pdf api

* fix: remove redundant gosling.js files. Remove shinybusy from examples.

* doc: add descriptions to params

* doc: add descriptions to params for visual channels

* doc: add docs to style props

* doc: remove empty examples from dicumentations

* doc: fix documentations

* doc: add author and maintainer

* fix: add js/node_modules to gitignore

* doc: fix Bioc package checks

* feat: add brush use case to examples

* fix: remove old examples

* fix: use plain if else instead of if_else due to this problem: https://stackoverflow.com/c/appsilon/questions/334

* fix: add bollean variable to convert views to list

* Anirban.sars cov2 example (#37)

* feat: add sars cov2 example

* feat: zoom out feature in sars cov2 example

* fix: change title of example apps

* feat: add placeholder hex sticker

* fix: R CMD check issues

* doc: update man pages

Co-authored-by: Federico Rivadeneira <federivadeneira@gmail.com>
@anirbanshaw24
anirbanshaw24 changed the base branch from fede.16-zoom-to to anirban.more-apis November 14, 2022 05:50
@anirbanshaw24
anirbanshaw24 changed the base branch from anirban.more-apis to fede.16-zoom-to November 14, 2022 05:50
@anirbanshaw24 anirbanshaw24 changed the title Anirban.fede.more apis Zoom to gene api added without examples Nov 14, 2022
@anirbanshaw24 anirbanshaw24 added the wontfix This will not be worked on label Nov 14, 2022
Base automatically changed from fede.16-zoom-to to dev November 15, 2022 23:38
@federiva

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We are blocked in this one Anirban, should we close it?

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