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Adding 18 RNA-Seq FASTQ files
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* .0692638 Tb in 18 files
* work dir: /diskmnt/Projects/cptac_scratch/CPTAC3.workflow/import.Y3/20220126.RNA-Seq16
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@mwyczalkowski
mwyczalkowski committed Jan 27, 2022
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18 changes: 18 additions & 0 deletions BamMap/katmai.BamMap.dat
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Expand Up @@ -12611,5 +12611,23 @@ C846363.RNA-Seq.R1.R C846363 GBM RNA-Seq recurrent_tumor /diskmnt/Projects/cptac
C846363.RNA-Seq.R1.T C846363 GBM RNA-Seq tumor /diskmnt/Projects/cptac/GDC_import/data/05606bfc-9000-4aa7-a4d1-694fc9ad6410/210713_UNC32-K00270_0291_AHLK5VBBXY_TACCGAGG-CCTGAACT_S3_L001_R1_001.fastq.gz 3798490040 FASTQ NA 05606bfc-9000-4aa7-a4d1-694fc9ad6410 katmai
C846363.RNA-Seq.R2.R C846363 GBM RNA-Seq recurrent_tumor /diskmnt/Projects/cptac/GDC_import/data/f3c87ab0-01ca-4b90-8c82-bd999d775e65/210811_UNC31-K00269_0301_AHLLC5BBXY_AGCTCGCT-GCAGAATC_S17_L005_R2_001.fastq.gz 4319818318 FASTQ NA f3c87ab0-01ca-4b90-8c82-bd999d775e65 katmai
C846363.RNA-Seq.R2.T C846363 GBM RNA-Seq tumor /diskmnt/Projects/cptac/GDC_import/data/347ecdcb-c3a6-4292-9e5c-cf7f6e0c58ca/210713_UNC32-K00270_0291_AHLK5VBBXY_TACCGAGG-CCTGAACT_S3_L001_R2_001.fastq.gz 4184403140 FASTQ NA 347ecdcb-c3a6-4292-9e5c-cf7f6e0c58ca katmai
GTEX-NPJ7-0011-R10A-SM-HAKXW.RNA-Seq.R1.A GTEX-NPJ7-0011-R10A-SM-HAKXW GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/bc06c745-5e1d-4360-98b5-5932622e5ad6/190702_UNC32-K00270_0187_AH7FK2BBXY_GCTTGTCA-GAACATAC_S13_L005_R1_001.fastq.gz 3765743130 FASTQ NA bc06c745-5e1d-4360-98b5-5932622e5ad6 katmai
GTEX-NPJ7-0011-R10A-SM-HAKXW.RNA-Seq.R2.A GTEX-NPJ7-0011-R10A-SM-HAKXW GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/0c2c947c-f8b3-4cf4-aa09-c4a484c21efc/190702_UNC32-K00270_0187_AH7FK2BBXY_GCTTGTCA-GAACATAC_S13_L005_R2_001.fastq.gz 4079829284 FASTQ NA 0c2c947c-f8b3-4cf4-aa09-c4a484c21efc katmai
GTEX-P44H-0011-R10A-SM-HAKXX.RNA-Seq.R1.A GTEX-P44H-0011-R10A-SM-HAKXX GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/eaee871f-6c1c-4b68-ae45-c02b26e03112/190715_UNC31-K00269_0232_BH7H7CBBXY_AGTTCAGG-CCAACAGA_S14_L004_R1_001.fastq.gz 3585455144 FASTQ NA eaee871f-6c1c-4b68-ae45-c02b26e03112 katmai
GTEX-P44H-0011-R10A-SM-HAKXX.RNA-Seq.R2.A GTEX-P44H-0011-R10A-SM-HAKXX GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/ac5d5942-5109-443b-a92f-a2cc70ea4764/190715_UNC31-K00269_0232_BH7H7CBBXY_AGTTCAGG-CCAACAGA_S14_L004_R2_001.fastq.gz 3823964368 FASTQ NA ac5d5942-5109-443b-a92f-a2cc70ea4764 katmai
GTEX-QVJO-0011-R10A-SM-HAKXV.RNA-Seq.R1.A GTEX-QVJO-0011-R10A-SM-HAKXV GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/3c47d5e3-b037-4bc6-80c2-eba31eeb58e0/190702_UNC32-K00270_0187_AH7FK2BBXY_GGACTTGG-CGCAGACG_S20_L006_R1_001.fastq.gz 3415853912 FASTQ NA 3c47d5e3-b037-4bc6-80c2-eba31eeb58e0 katmai
GTEX-QVJO-0011-R10A-SM-HAKXV.RNA-Seq.R2.A GTEX-QVJO-0011-R10A-SM-HAKXV GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/222a2d66-7b96-4170-bf35-7b9c23d8953f/190702_UNC32-K00270_0187_AH7FK2BBXY_GGACTTGG-CGCAGACG_S20_L006_R2_001.fastq.gz 3709398511 FASTQ NA 222a2d66-7b96-4170-bf35-7b9c23d8953f katmai
GTEX-R55F-0011-R10A-SM-HAKXY.RNA-Seq.R1.A GTEX-R55F-0011-R10A-SM-HAKXY GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/ebbf052b-938b-4978-87bb-e203ecd9ea8d/190702_UNC32-K00270_0187_AH7FK2BBXY_TTATAACC-GATATCGA_S17_L006_R1_001.fastq.gz 4465868783 FASTQ NA ebbf052b-938b-4978-87bb-e203ecd9ea8d katmai
GTEX-R55F-0011-R10A-SM-HAKXY.RNA-Seq.R2.A GTEX-R55F-0011-R10A-SM-HAKXY GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/5493009c-4e84-42d1-845e-f597e8538bdf/190702_UNC32-K00270_0187_AH7FK2BBXY_TTATAACC-GATATCGA_S17_L006_R2_001.fastq.gz 4376071746 FASTQ NA 5493009c-4e84-42d1-845e-f597e8538bdf katmai
GTEX-RN5K-0011-R10A-SM-HAKXU.RNA-Seq.R1.A GTEX-RN5K-0011-R10A-SM-HAKXU GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/ae85444e-59ad-43b5-bab7-4c138b7291af/190702_UNC32-K00270_0187_AH7FK2BBXY_CCGCGGTT-AGCGCTAG_S18_L006_R1_001.fastq.gz 5085066252 FASTQ NA ae85444e-59ad-43b5-bab7-4c138b7291af katmai
GTEX-RN5K-0011-R10A-SM-HAKXU.RNA-Seq.R2.A GTEX-RN5K-0011-R10A-SM-HAKXU GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/41592dab-9730-40dc-8c7a-1c164445e2fc/190702_UNC32-K00270_0187_AH7FK2BBXY_CCGCGGTT-AGCGCTAG_S18_L006_R2_001.fastq.gz 5392721495 FASTQ NA 41592dab-9730-40dc-8c7a-1c164445e2fc katmai
GTEX-RU72-0011-R10A-SM-HAKXS.RNA-Seq.R1.A GTEX-RU72-0011-R10A-SM-HAKXS GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/991c731a-f70e-46c6-82f8-fe5b1c4f2014/190702_UNC32-K00270_0187_AH7FK2BBXY_CAAGCTAG-ACATAGCG_S16_L005_R1_001.fastq.gz 4343747954 FASTQ NA 991c731a-f70e-46c6-82f8-fe5b1c4f2014 katmai
GTEX-RU72-0011-R10A-SM-HAKXS.RNA-Seq.R2.A GTEX-RU72-0011-R10A-SM-HAKXS GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/169530bc-e43c-40b8-938d-55fc0c5afbb2/190702_UNC32-K00270_0187_AH7FK2BBXY_CAAGCTAG-ACATAGCG_S16_L005_R2_001.fastq.gz 4681867735 FASTQ NA 169530bc-e43c-40b8-938d-55fc0c5afbb2 katmai
GTEX-UTHO-0011-R10A-SM-HAKY2.RNA-Seq.R1.A GTEX-UTHO-0011-R10A-SM-HAKY2 GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/440b3a6f-55b1-4a6e-b60f-875dff4a1648/190702_UNC32-K00270_0187_AH7FK2BBXY_AAGTCCAA-TATGAGTA_S15_L005_R1_001.fastq.gz 3264885576 FASTQ NA 440b3a6f-55b1-4a6e-b60f-875dff4a1648 katmai
GTEX-UTHO-0011-R10A-SM-HAKY2.RNA-Seq.R2.A GTEX-UTHO-0011-R10A-SM-HAKY2 GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/f64b4605-5731-4f25-b62a-c0bb5e52402e/190702_UNC32-K00270_0187_AH7FK2BBXY_AAGTCCAA-TATGAGTA_S15_L005_R2_001.fastq.gz 3488807105 FASTQ NA f64b4605-5731-4f25-b62a-c0bb5e52402e katmai
GTEX-WVLH-0011-R10A-SM-HAKXZ.RNA-Seq.R1.A GTEX-WVLH-0011-R10A-SM-HAKXZ GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/cdf168a3-2eb6-4368-bf54-f23950626b10/190715_UNC31-K00269_0232_BH7H7CBBXY_GACCTGAA-TTGGTGAG_S15_L004_R1_001.fastq.gz 4306549496 FASTQ NA cdf168a3-2eb6-4368-bf54-f23950626b10 katmai
GTEX-WVLH-0011-R10A-SM-HAKXZ.RNA-Seq.R2.A GTEX-WVLH-0011-R10A-SM-HAKXZ GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/aec464aa-f28d-407d-a76f-869a3121d472/190715_UNC31-K00269_0232_BH7H7CBBXY_GACCTGAA-TTGGTGAG_S15_L004_R2_001.fastq.gz 4425085797 FASTQ NA aec464aa-f28d-407d-a76f-869a3121d472 katmai
GTEX-Y8DK-0011-R10A-SM-HAKY1.RNA-Seq.R1.A GTEX-Y8DK-0011-R10A-SM-HAKY1 GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/682b4036-c822-40d0-9662-2c18077f8493/190715_UNC31-K00269_0232_BH7H7CBBXY_TGGATCGA-GTGCGATA_S13_L004_R1_001.fastq.gz 4854888143 FASTQ NA 682b4036-c822-40d0-9662-2c18077f8493 katmai
GTEX-Y8DK-0011-R10A-SM-HAKY1.RNA-Seq.R2.A GTEX-Y8DK-0011-R10A-SM-HAKY1 GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/43e9394a-420b-4a99-907a-2f0a293a9f1c/190715_UNC31-K00269_0232_BH7H7CBBXY_TGGATCGA-GTGCGATA_S13_L004_R2_001.fastq.gz 5090597822 FASTQ NA 43e9394a-420b-4a99-907a-2f0a293a9f1c katmai
PT-Q2AG.RNA-Seq.R1.A PT-Q2AG GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/624298d8-62b5-48e2-8dbb-114aa81b99b3/201030_UNC32-K00270_0263_AHJ7K3BBXY_CCGCGGTT-AGCGCTAG_S8_L003_R1_001.fastq.gz 5898206072 FASTQ NA 624298d8-62b5-48e2-8dbb-114aa81b99b3 katmai
PT-Q2AG.RNA-Seq.R2.A PT-Q2AG GBM RNA-Seq tissue_normal /diskmnt/Projects/cptac/GDC_import/data/0fce5ae6-0a02-4802-8167-dd6405540e55/201030_UNC32-K00270_0263_AHJ7K3BBXY_CCGCGGTT-AGCGCTAG_S8_L003_R2_001.fastq.gz 6587430382 FASTQ NA 0fce5ae6-0a02-4802-8167-dd6405540e55 katmai

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