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Adding WXS_MSI results for 7 AML cases (batch1123)
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mwyczalkowski committed Jan 4, 2023
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14 changes: 14 additions & 0 deletions DCC_Analysis_Summary/WXS_MSI.DCC_analysis_summary.dat
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Expand Up @@ -1577,6 +1577,8 @@ C3L-06361 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v
C3L-06361 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06361.somatic.sites.tsv 2075 TSV f70559c6981c3bfebfc59243547d3fde C3L-06361.WXS.T.hg38 7b21cc41-fe38-43fe-b81c-d4a64da6761a C3L-06361.WXS.N.hg38 da2e2061-120f-44eb-90c4-e49d0abe0df4
C3L-06364 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06364.MSI.WXS.dat 61 DAT 8308c3faf1a54dfc7dbbeb26d7b1eeb7 C3L-06364.WXS.T.hg38 4ddad72e-d954-4d7d-a59e-20d0ddcbd7f5 C3L-06364.WXS.N.hg38 781cad08-5f3f-483a-b56a-0415097dd98e
C3L-06364 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06364.somatic.sites.tsv 431 TSV 30184f4242a9414a3dddcb06c237f7e1 C3L-06364.WXS.T.hg38 4ddad72e-d954-4d7d-a59e-20d0ddcbd7f5 C3L-06364.WXS.N.hg38 781cad08-5f3f-483a-b56a-0415097dd98e
C3L-06368 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-06368.MSI.WXS.dat 62 DAT 9501b119e30390d33123a41efde6a730 C3L-06368.WXS.T.hg38 4c8d49db-dfe8-477a-b33d-903a587afed1 C3L-06368.WXS.N.hg38 431be984-ae6d-416d-9841-1b56a4ceeb6f
C3L-06368 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-06368.somatic.sites.tsv 930 TSV 15215246c2b6c2c37251f46ed8b9e306 C3L-06368.WXS.T.hg38 4c8d49db-dfe8-477a-b33d-903a587afed1 C3L-06368.WXS.N.hg38 431be984-ae6d-416d-9841-1b56a4ceeb6f
C3L-06369 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06369.MSI.WXS.dat 63 DAT 14dc74e0eb796f89d0feec5d7d21918c C3L-06369.WXS.T.hg38 2a646771-d8fc-4833-807f-d3ee0871497a C3L-06369.WXS.N.hg38 cfec7a25-deba-47ba-baa1-a98913007129
C3L-06369 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06369.somatic.sites.tsv 17990 TSV 4a5f5199b1a41e80b7249202f5a739e1 C3L-06369.WXS.T.hg38 2a646771-d8fc-4833-807f-d3ee0871497a C3L-06369.WXS.N.hg38 cfec7a25-deba-47ba-baa1-a98913007129
C3L-06374 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-06374.MSI.WXS.dat 61 DAT 030ec06f49bac681444735b16701ad29 C3L-06374.WXS.T.hg38 9904b87f-a661-42a8-ad84-d5d7395609c8 C3L-06374.WXS.N.hg38 91de498d-bc4c-4448-a7ec-eda0c295ee08
Expand Down Expand Up @@ -1631,14 +1633,26 @@ C3L-07012 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v
C3L-07012 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07012.somatic.sites.tsv 0 TSV d41d8cd98f00b204e9800998ecf8427e C3L-07012.WXS.T.hg38 6c2f3c3e-b9b1-4215-bece-7fbfaa266226 C3L-07012.WXS.N.hg38 64e2bdb1-f10f-420d-a03e-60e7d01af376
C3L-07013 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07013.MSI.WXS.dat 61 DAT 3205a86d504b4a8a3c17a5a87858fb51 C3L-07013.WXS.T.hg38 77b57be8-82b9-4fbd-94cf-cdb1624b219c C3L-07013.WXS.N.hg38 6d83953f-9d59-45fd-9f1c-48d917f0efe9
C3L-07013 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07013.somatic.sites.tsv 301 TSV 829796e5882de902b1ac5f30156d57a9 C3L-07013.WXS.T.hg38 77b57be8-82b9-4fbd-94cf-cdb1624b219c C3L-07013.WXS.N.hg38 6d83953f-9d59-45fd-9f1c-48d917f0efe9
C3L-07019 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07019.MSI.WXS.dat 61 DAT 462b9cb7517b8564cbdede11b573c903 C3L-07019.WXS.T.hg38 47829483-44ec-4b8f-ab01-31bec24a53e6 C3L-07019.WXS.N.hg38 fd859c96-110c-404f-b830-598ebb95a224
C3L-07019 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07019.somatic.sites.tsv 362 TSV cffb01957cc0fffb1b1cfe81148f37b4 C3L-07019.WXS.T.hg38 47829483-44ec-4b8f-ab01-31bec24a53e6 C3L-07019.WXS.N.hg38 fd859c96-110c-404f-b830-598ebb95a224
C3L-07202 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07202.MSI.WXS.dat 63 DAT c02f9a6a5b8bc65f9a47bb2d6b10f774 C3L-07202.WXS.T.hg38 5c4c8930-d564-4e1a-97bd-5971d536af18 C3L-07202.WXS.N.hg38 5d21eff9-b0d4-40dd-ad5d-fd6387a07eed
C3L-07202 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07202.somatic.sites.tsv 7486 TSV 65066fc6c6ecab36e632733a0d480979 C3L-07202.WXS.T.hg38 5c4c8930-d564-4e1a-97bd-5971d536af18 C3L-07202.WXS.N.hg38 5d21eff9-b0d4-40dd-ad5d-fd6387a07eed
C3L-07213 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07213.MSI.WXS.dat 62 DAT 76c36a4b96235ff2805f7525950f339e C3L-07213.WXS.T.hg38 57461fc1-881f-4b14-9c8c-6c795a225e1f C3L-07213.WXS.N.hg38 51e744f3-1253-44bf-9b98-c26271785d96
C3L-07213 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07213.somatic.sites.tsv 801 TSV 339e226db6aaee0647ed3cbe1d3fe309 C3L-07213.WXS.T.hg38 57461fc1-881f-4b14-9c8c-6c795a225e1f C3L-07213.WXS.N.hg38 51e744f3-1253-44bf-9b98-c26271785d96
C3L-07437 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07437.MSI.WXS.dat 61 DAT b7d68f2e85d840b8d91632df2535901c C3L-07437.WXS.T.hg38 c030fb7f-77a4-4c1f-8a7e-06a6f91bef61 C3L-07437.WXS.N.hg38 2d79233e-307d-4835-b070-47feba860d01
C3L-07437 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07437.somatic.sites.tsv 57 TSV f718b3e3a9627cd6114f9ef9f42d81aa C3L-07437.WXS.T.hg38 c030fb7f-77a4-4c1f-8a7e-06a6f91bef61 C3L-07437.WXS.N.hg38 2d79233e-307d-4835-b070-47feba860d01
C3L-07438 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07438.MSI.WXS.dat 61 DAT 0fcab8336b46a56daf6d83a32fe2ad90 C3L-07438.WXS.T.hg38 ae450a06-487a-4d89-b2dd-e8aac197f3d6 C3L-07438.WXS.N.hg38 bc7cc37e-99f4-496c-bf75-933da02323a5
C3L-07438 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07438.somatic.sites.tsv 484 TSV 283ae76aa0d044990ae27b97b2171f47 C3L-07438.WXS.T.hg38 ae450a06-487a-4d89-b2dd-e8aac197f3d6 C3L-07438.WXS.N.hg38 bc7cc37e-99f4-496c-bf75-933da02323a5
C3L-07439 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07439.MSI.WXS.dat 61 DAT 8ed8cefb539a34e35fe5aac37bb1600d C3L-07439.WXS.T.hg38 c2f2bdfe-749a-4ba2-bd39-fee94d5b2e30 C3L-07439.WXS.N.hg38 eed05d67-1bf7-436f-bfdb-b07dd6beb964
C3L-07439 AML WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07439.somatic.sites.tsv 58 TSV 674c3f1457ced930102b63a4f088e256 C3L-07439.WXS.T.hg38 c2f2bdfe-749a-4ba2-bd39-fee94d5b2e30 C3L-07439.WXS.N.hg38 eed05d67-1bf7-436f-bfdb-b07dd6beb964
C3L-07488 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07488.MSI.WXS.dat 63 DAT 06a19589930b07ca9b44cf22d0b42914 C3L-07488.WXS.T.hg38 e64932e3-3ae2-4b27-a26f-7c779b11e8ce C3L-07488.WXS.N.hg38 e8feacbe-f33f-4a81-a083-7f8943ab8acd
C3L-07488 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07488.somatic.sites.tsv 9937 TSV cb6063dc43a77c67683054ad4186365b C3L-07488.WXS.T.hg38 e64932e3-3ae2-4b27-a26f-7c779b11e8ce C3L-07488.WXS.N.hg38 e8feacbe-f33f-4a81-a083-7f8943ab8acd
C3L-07571 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07571.MSI.WXS.dat 62 DAT fb2133d5cbda76315eef8e2f00ccf85f C3L-07571.WXS.T.hg38 d8825d20-1a40-44f8-8904-033752c3f3d5 C3L-07571.WXS.N.hg38 047efbf7-3f30-4e72-8121-f1b6d24124a4
C3L-07571 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07571.somatic.sites.tsv 863 TSV 4630af1c051535a2f68a58406425cc66 C3L-07571.WXS.T.hg38 d8825d20-1a40-44f8-8904-033752c3f3d5 C3L-07571.WXS.N.hg38 047efbf7-3f30-4e72-8121-f1b6d24124a4
C3L-07580 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07580.MSI.WXS.dat 62 DAT 1061f76587446fecc20b48d86bde345a C3L-07580.WXS.T.hg38 6731b430-5d7a-47c5-ae35-9574fb9373e8 C3L-07580.WXS.N.hg38 cabb81e0-06ee-4b8e-8825-3255bf40595f
C3L-07580 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07580.somatic.sites.tsv 5897 TSV 65759ee49cc0507e00b4a58c5def728b C3L-07580.WXS.T.hg38 6731b430-5d7a-47c5-ae35-9574fb9373e8 C3L-07580.WXS.N.hg38 cabb81e0-06ee-4b8e-8825-3255bf40595f
C3L-07588 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07588.MSI.WXS.dat 62 DAT d36df4a8d7a78e8fe747430be8bd842b C3L-07588.WXS.T.hg38 b9371452-d0a8-4db2-9eb9-9a7388301cc1 C3L-07588.WXS.N.hg38 7de34f0d-b4f8-4a3c-a39f-a24318894ff0
C3L-07588 AML WXS_MSI v1.5 20230103 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WXS_MSI_v1.5_batch1123b_20230103/C3L-07588.somatic.sites.tsv 804 TSV 14304a0205d26ff690452801b1888383 C3L-07588.WXS.T.hg38 b9371452-d0a8-4db2-9eb9-9a7388301cc1 C3L-07588.WXS.N.hg38 7de34f0d-b4f8-4a3c-a39f-a24318894ff0
C3L-07611 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07611.MSI.WXS.dat 61 DAT 29047c06ff5d2eb978ef97c49821b9ad C3L-07611.WXS.T.hg38 66ea66b9-4620-4c09-a59d-f9b1c0bcb09f C3L-07611.WXS.N.hg38 49d7c1cf-db69-41a6-9cbb-88f382ced875
C3L-07611 GBM WXS_MSI v1.5 20220920 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_MSI_v1.5_WXS_MSI.batch_822_20220920/C3L-07611.somatic.sites.tsv 546 TSV e5ef3cac893357d32d5c24c1e74e265a C3L-07611.WXS.T.hg38 66ea66b9-4620-4c09-a59d-f9b1c0bcb09f C3L-07611.WXS.N.hg38 49d7c1cf-db69-41a6-9cbb-88f382ced875
C3N-00148 CCRCC WXS_MSI v1.1 20180809 Y1 /CPTAC3_WashU_hg38/CCRCC/WXS_MSI_hg38_v1.1_20180809/C3N-00148_sites.tsv 67 TSV da0e9dd00c1edd1780071ccd2d64a721 Unknown.Y1 Unknown.Y1 Unknown.Y1 Unknown.Y1
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