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Adding Y3 results
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@mwyczalkowski
mwyczalkowski committed Jun 3, 2022
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Last updated: 4/19/21
Last updated: 5/17/21

**BOLD** are new since 3/18/22
**BOLD** are new since 4/20/22

## Analysis Summaries - Case counts - Y3 only
Pipeline | AML | CCRCC | CM | GBM | HNSCC | LSCC | LUAD | PDA | SAR | UCEC | Total
--- | --- | ----- | --- | --- | ----- | ---- | ---- | --- | --- | ---- | ---
Methylation Array | **115** | 260 | 8 | 205 | 111 | 202 | 229 | 164 | 19 | 249 | **1562**
miRNA-Seq | **83** | 82 | 3 |239| 22 | 104 | 72 | 164 | 0 | 35 | **804**
RNA-Seq Expression | **101** | 261 | 8 | 189 | 111 | 202 | 229 | 186 | 19 | 252 | **1558**
RNA-Seq Fusion | **171** | 110 | 0 |116| 0 | 89 | 109 | 81 | 0 | 170 | **846**
RNA-Seq Transcript + Splicing | **172** | 149 | 0 | 136 | 0 | 89 | 208 | 103 | 0 | 170 | **1027**
WGS CNV Somatic | **29** | 258 | 0 | 187 | 111 | 202 | 219 | 166 | 0 | 243 | **1415**
WGS SV | **35** | 258 | 0 | 129 | 111 | 173 | 109 | 108 | 0 | 204 | **1218**
WXS MSI | **42** | 193 | 0 | 71 | 0 | 89 | 108 | 166 | 0 | 104 | **773**
WXS Somatic TD | **42** | 259 | 0 | 185 | 111 | 202 | 218 | 181 | 0 | 233 | **1443**
WXS Somatic SW | 0 | 260 | 0 | 185 | 111 | 202 | 110 | 181 | 0 | 247 |1296
WXS Germline | **42** | 259 | 0 | 186 | 111 | 199 |229| 166 | 0 | 233 | **1425**
Methylation Array | 115 | 260 | 8 | 205 | 111 | 202 | 229 | 164 | 19 | 249 | 1562
miRNA-Seq | 83 | 82 | 3 |239| 22 | 104 | 72 | 164 | 0 | 35 | 804
RNA-Seq Expression | 101 | 261 | 8 | 189 | 111 | 202 | 229 | 186 | 19 | 252 | 1558
RNA-Seq Fusion | 171 | 110 | 0 |116| 0 | 89 | 109 | 81 | 0 | 170 | 846
RNA-Seq Transcript + Splicing | 172 | 149 | 0 | 136 | 0 | 89 | 208 | 103 | 0 | 170 | 1027
WGS CNV Somatic | 29 | 258 | 0 | 187 | 111 | 202 | 219 | 166 | 0 | 243 | 1415
WGS SV | 35 | 258 | 0 | 129 | 111 | 173 | 109 | 108 | 0 | 204 | 1218
WXS MSI | 42 | 193 | 0 | 71 | 0 | 89 | 108 | 166 | 0 | 104 | 773
WXS Somatic TD | 42 | 259 | 0 | 185 | 111 | 202 | 218 | 181 | 0 | 233 | 1443
WXS Somatic SW | **42** | 260 | 0 | 185 | 111 | 202 | 110 | 181 | 0 | 247 |**1338**
WXS Germline | 42 | 259 | 0 | 186 | 111 | 199 |229| 166 | 0 | 233 | 1425

<!-- Note, WXS Somatic CCRCC was not reported to DCC analysis summary -->
## All results (Y1, Y2, Y3) - Case counts
Expand All @@ -32,7 +32,7 @@ WGS CNV Somatic | 29 | 258 | 0 | 187 | 111 | 202 | 229
WGS SV | 35 | 258 | 0 | 187 | 111 | 201 | 219 | 166 | 0 | 243 | 1511
WXS MSI | 42 | 259 | 0 | 188 | 111 | 202 | 219 | 166 | 0 | 247 | 1434
WXS Somatic TD | 42 | 259 | 0 | 185 | 111 | 202 | 218 | 181 | 0 | 233 | 1443
WXS Somatic SW | 0 | 260 | 0 | 185 | 111 | 202 | 218 | 181 | 0 | 247 | 1404
WXS Somatic SW | 42 | 260 | 0 | 185 | 111 | 202 | 218 | 181 | 0 | 247 | 1446
WXS Germline | 42 | 259 | 0 | 186 | 111 | 199 | 229 | 166 | 0 | 233 | 1425

<!-- Note - TD numbers don't add up... -->
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