Skip to content

Commit

Permalink
Adding results from discovery 2/9/2021
Browse files Browse the repository at this point in the history 
* work dir: mammoth:/home/mwyczalk_test/Projects/CPTAC3/discovery/discover.20210209
  • Loading branch information
@mwyczalkowski
mwyczalkowski committed Feb 10, 2021
1 parent 5ca1ee5 commit 712a8a6
Show file tree
Hide file tree
Showing 2 changed files with 28 additions and 7 deletions.
14 changes: 7 additions & 7 deletions CPTAC3.Catalog.Summary.dat
View file
Original file line number Diff line number Diff line change
Expand Up @@ -1214,7 +1214,7 @@ C3L-03502 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq
C3L-03503 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03506 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03508 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03513 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03513 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-03517 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03518 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-03528 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
Expand Down Expand Up @@ -1948,12 +1948,12 @@ C3L-05849 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq
C3L-05870 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-05872 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-06169 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA
C3L-07032 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07033 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07034 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07035 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07036 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07037 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-07032 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-07033 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-07034 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-07035 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-07036 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3L-07037 PDA WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
C3N-00000 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-00147 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-00148 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 TTTT N A WXS.hg38 TTTT N A RNA.hg38 TTTTTTTTTTTT AAA miRNA.hg38 TTTT A MethArray TTTTTTTT
Expand Down
21 changes: 21 additions & 0 deletions CPTAC3.Catalog.dat
View file
Original file line number Diff line number Diff line change
Expand Up @@ -12218,8 +12218,11 @@ C3L-03497.WXS.Nbc C3L-03497 AML WXS buccal_normal CPT0230660001 CPT0230660001.Wh
C3L-03497.WXS.Nbc.hg38 C3L-03497 AML WXS buccal_normal CPT0230660001 bf771a0d-734e-4a46-a7fb-e8a733e9e17b_wxs_gdc_realn.bam 37341337754 BAM NA 348a2f38-a72f-45bf-8a42-1e6ee6119a96 b07b28db79ce6800a7529b94de852ac1 hg38 Buccal Cell Normal C3L-03497-51,C3L-03497-52,C3L-03497-53
C3L-03497.WXS.Tbm C3L-03497 AML WXS tumor_bone_marrow CPT0230630002 CPT0230630002.WholeExome.RP-1303.bam 31660225444 BAM NA ac914571-3786-439f-8e5f-44d698220470 fe803097fc6a703f503c2ad92d93c173 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03497-54
C3L-03497.WXS.Tbm.hg38 C3L-03497 AML WXS tumor_bone_marrow CPT0230630002 450e4b1c-4c7f-445e-91bb-880d0024fa02_wxs_gdc_realn.bam 44535114934 BAM NA a4ef610e-d021-431b-9e73-76fe7a7ae06a fc9be7309be29eeeb11cf64b2f3f0156 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03497-54
C3L-03513.RNA-Seq.chimeric.A.hg38 C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 842aa67b-623e-4595-8019-bcc44b4cb203.rna_seq.chimeric.gdc_realn.bam 204655296 BAM chimeric 1e3557a1-b3ec-41ec-aa4b-90140d2657d2 aab1cc93c916ed1c60e537b0a3905200 hg38 Solid Tissue Normal C3L-03513-01
C3L-03513.RNA-Seq.genomic.A.hg38 C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 842aa67b-623e-4595-8019-bcc44b4cb203.rna_seq.genomic.gdc_realn.bam 8448899163 BAM genomic 347f036d-5bf1-4f46-bbfa-0299d8d06da1 2c4e41b9fe6f5acbd8ba851c284f4646 hg38 Solid Tissue Normal C3L-03513-01
C3L-03513.RNA-Seq.R1.A C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 200731_UNC31-K00269_0286_AHHWJ2BBXY_CAACAATG-CTTCACGG_S6_L002_R1_001.fastq.gz 4012444445 FASTQ NA 30c65fa6-6f8c-41cc-ae25-6089adc93750 472f5d53e2220e0541d3fd3aef11257f NA Solid Tissue Normal C3L-03513-01
C3L-03513.RNA-Seq.R2.A C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 200731_UNC31-K00269_0286_AHHWJ2BBXY_CAACAATG-CTTCACGG_S6_L002_R2_001.fastq.gz 4410946219 FASTQ NA 4f9e894b-8949-486f-ae58-ee15c1d111bf 054f5b8f4ebef2424a220403067010d8 NA Solid Tissue Normal C3L-03513-01
C3L-03513.RNA-Seq.transcriptome.A.hg38 C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 842aa67b-623e-4595-8019-bcc44b4cb203.rna_seq.transcriptome.gdc_realn.bam 9971583430 BAM transcriptome 0504f620-67cb-4ae7-ab33-c3fa0c0f8eda 067cbdc7504b92ecefa03fc4573619e9 hg38 Solid Tissue Normal C3L-03513-01
C3L-03547.MethArray.Green.T C3L-03547 GBM Methylation Array tumor CPT0324550012 204372030024_R03C01_Grn.idat 13677905 IDAT Green 7c9b6d92-8421-4e60-b6b2-898813838938 64cab40ad148f26409e7183d3070a00c NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03
C3L-03547.MethArray.Red.T C3L-03547 GBM Methylation Array tumor CPT0324550012 204372030024_R03C01_Red.idat 13677905 IDAT Red 24a977f4-8fb6-4a87-acc1-4b94eaddabdc 3dec3027b377b23c8d75e9a93477b911 NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03
C3L-03547.miRNA-Seq.T C3L-03547 GBM miRNA-Seq tumor CPT0324550015 201209_UNC32-K00270_0265_AHJ55WBBXY_CACCGG_S7_L006_R1_001.unaln.bam 215790967 BAM NA 1cc58189-1c07-4b61-91d3-b204930e5912 38dc2c41154c0e36d79f55b68bf7f970 NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03
Expand Down Expand Up @@ -15970,18 +15973,36 @@ C3L-06169.WXS.N C3L-06169 LSCC WXS blood_normal CPT0294750002 CPT0294750002.Whol
C3L-06169.WXS.N.hg38 C3L-06169 LSCC WXS blood_normal CPT0294750002 0eba5f38-b9b6-497d-87d8-5e5f04324c28_wxs_gdc_realn.bam 36419327281 BAM NA e4516e9f-55ec-4d26-95da-94432a652dd6 bb7d77083bd16a530863ad73f24f685f hg38 Blood Derived Normal C3L-06169-31
C3L-06169.WXS.T C3L-06169 LSCC WXS tumor CPT0294630006 CPT0294630006.WholeExome.RP-1303.bam 19082996953 BAM NA 57f91759-b383-4792-971a-3402dfe2f5c4 71efa1f248b1785073c7aa2f2fea604d hg19 Primary Tumor C3L-06169-05
C3L-06169.WXS.T.hg38 C3L-06169 LSCC WXS tumor CPT0294630006 4aa15ba7-8f09-406f-9950-0dbaad1751f0_wxs_gdc_realn.bam 26741225402 BAM NA f1cc54af-4370-4abb-82c2-d0d4dc3f7591 6b4e5fc677d27ac25cc5b86a8223eb0e hg38 Primary Tumor C3L-06169-05
C3L-07032.RNA-Seq.chimeric.A.hg38 C3L-07032 PDA RNA-Seq tissue_normal CPT0347760005 53ee9ccb-3048-4123-9b1a-6f286e2ee069.rna_seq.chimeric.gdc_realn.bam 63101475 BAM chimeric 1ba5c14b-7ff1-46cf-b88e-256b37e2427a 1d3bff362c80a0ab10c05f5a9644eb9f hg38 Solid Tissue Normal C3L-07032-01
C3L-07032.RNA-Seq.genomic.A.hg38 C3L-07032 PDA RNA-Seq tissue_normal CPT0347760005 53ee9ccb-3048-4123-9b1a-6f286e2ee069.rna_seq.genomic.gdc_realn.bam 9496427474 BAM genomic 1bb96c79-335f-49d0-a3f5-a9ceb8597ccb ffb5add6a7a217aa1bd4a7beb517bee9 hg38 Solid Tissue Normal C3L-07032-01
C3L-07032.RNA-Seq.R1.A C3L-07032 PDA RNA-Seq tissue_normal CPT0347760005 200731_UNC31-K00269_0286_AHHWJ2BBXY_AACAGGTT-ATACCAAG_S5_L002_R1_001.fastq.gz 4359507199 FASTQ NA 88ba9750-4977-49cb-9058-c68e1b1b7570 d258562bc158932ff5f7cc321078289d NA Solid Tissue Normal C3L-07032-01
C3L-07032.RNA-Seq.R2.A C3L-07032 PDA RNA-Seq tissue_normal CPT0347760005 200731_UNC31-K00269_0286_AHHWJ2BBXY_AACAGGTT-ATACCAAG_S5_L002_R2_001.fastq.gz 4600968470 FASTQ NA f37f4fc1-e819-471b-8ad1-0bf07194d51f 4540caa5c0093d8f223c2241ff8d46ed NA Solid Tissue Normal C3L-07032-01
C3L-07032.RNA-Seq.transcriptome.A.hg38 C3L-07032 PDA RNA-Seq tissue_normal CPT0347760005 53ee9ccb-3048-4123-9b1a-6f286e2ee069.rna_seq.transcriptome.gdc_realn.bam 11805312153 BAM transcriptome 1334c0fd-b371-45f4-9171-cfd7e947c76c b99cb1fb9ca354c76b41ed6ddf21c591 hg38 Solid Tissue Normal C3L-07032-01
C3L-07033.RNA-Seq.chimeric.A.hg38 C3L-07033 PDA RNA-Seq tissue_normal CPT0347790005 5d446ce9-7572-43c4-9be0-defc29dd7d6b.rna_seq.chimeric.gdc_realn.bam 95588020 BAM chimeric f13adc65-0459-4c24-8701-9969dd399bd4 985c0855184b3f08fdc1c03f2687c73f hg38 Solid Tissue Normal C3L-07033-01
C3L-07033.RNA-Seq.genomic.A.hg38 C3L-07033 PDA RNA-Seq tissue_normal CPT0347790005 5d446ce9-7572-43c4-9be0-defc29dd7d6b.rna_seq.genomic.gdc_realn.bam 10282231536 BAM genomic 116fa544-d8af-4017-b949-394d9b3d086d 85432c491f60699a8c246b15f920e772 hg38 Solid Tissue Normal C3L-07033-01
C3L-07033.RNA-Seq.R1.A C3L-07033 PDA RNA-Seq tissue_normal CPT0347790005 200731_UNC31-K00269_0286_AHHWJ2BBXY_TGGTGGCA-TCCTGTAA_S7_L002_R1_001.fastq.gz 4531104702 FASTQ NA 37537c02-5de7-4494-ae9e-e4e717f391fb 6fac3f865d8c6f5c48359817292329fa NA Solid Tissue Normal C3L-07033-01
C3L-07033.RNA-Seq.R2.A C3L-07033 PDA RNA-Seq tissue_normal CPT0347790005 200731_UNC31-K00269_0286_AHHWJ2BBXY_TGGTGGCA-TCCTGTAA_S7_L002_R2_001.fastq.gz 5091753246 FASTQ NA e074f8ea-87fc-499f-b028-738c12b62cbc 340a21e302db95bcc30b88ce28f9ea4e NA Solid Tissue Normal C3L-07033-01
C3L-07033.RNA-Seq.transcriptome.A.hg38 C3L-07033 PDA RNA-Seq tissue_normal CPT0347790005 5d446ce9-7572-43c4-9be0-defc29dd7d6b.rna_seq.transcriptome.gdc_realn.bam 10262751426 BAM transcriptome 35b1dfc2-4410-46c3-83fc-bd068098f99d 60c145ad2cba9f8c2039d76f0ed491dc hg38 Solid Tissue Normal C3L-07033-01
C3L-07034.RNA-Seq.chimeric.A.hg38 C3L-07034 PDA RNA-Seq tissue_normal CPT0347820005 210dfc8a-9ab8-4dc8-8002-939823690011.rna_seq.chimeric.gdc_realn.bam 50238801 BAM chimeric 272e3efb-47b1-49a9-9030-1a2a5e152f80 1e32c733c3c90da5cbe83f7c8214b7b8 hg38 Solid Tissue Normal C3L-07034-01
C3L-07034.RNA-Seq.genomic.A.hg38 C3L-07034 PDA RNA-Seq tissue_normal CPT0347820005 210dfc8a-9ab8-4dc8-8002-939823690011.rna_seq.genomic.gdc_realn.bam 7963264496 BAM genomic e7978ba1-e61a-48fa-81ab-6eb68e205eb0 e66fc7947a6bfa0fea9bc140832de1a2 hg38 Solid Tissue Normal C3L-07034-01
C3L-07034.RNA-Seq.R1.A C3L-07034 PDA RNA-Seq tissue_normal CPT0347820005 200731_UNC31-K00269_0286_AHHWJ2BBXY_AGGCAGAG-AGAATGCC_S1_L001_R1_001.fastq.gz 3190444841 FASTQ NA 156bec6c-7178-4b00-8d6b-cb5bae408463 8b459572f95ede52eb1525cb4d56ea45 NA Solid Tissue Normal C3L-07034-01
C3L-07034.RNA-Seq.R2.A C3L-07034 PDA RNA-Seq tissue_normal CPT0347820005 200731_UNC31-K00269_0286_AHHWJ2BBXY_AGGCAGAG-AGAATGCC_S1_L001_R2_001.fastq.gz 3715062124 FASTQ NA d9794500-bac2-45f1-a463-d7e90fa594ab 522f76dcca840f1b285f8d49645ce33c NA Solid Tissue Normal C3L-07034-01
C3L-07034.RNA-Seq.transcriptome.A.hg38 C3L-07034 PDA RNA-Seq tissue_normal CPT0347820005 210dfc8a-9ab8-4dc8-8002-939823690011.rna_seq.transcriptome.gdc_realn.bam 8288989317 BAM transcriptome 61bb78cc-7afd-49a7-95d5-17764ad350c1 82a8dae88b6d1188d6bd88640ec0f0f1 hg38 Solid Tissue Normal C3L-07034-01
C3L-07035.RNA-Seq.chimeric.A.hg38 C3L-07035 PDA RNA-Seq tissue_normal CPT0347850005 af235ec2-8e46-4903-819d-967a8f000802.rna_seq.chimeric.gdc_realn.bam 65312248 BAM chimeric 27052e15-7a40-4566-b34f-511fe717cda8 222e880fafef3947612530ed52b6cc88 hg38 Solid Tissue Normal C3L-07035-01
C3L-07035.RNA-Seq.genomic.A.hg38 C3L-07035 PDA RNA-Seq tissue_normal CPT0347850005 af235ec2-8e46-4903-819d-967a8f000802.rna_seq.genomic.gdc_realn.bam 9866815856 BAM genomic 1650a48f-6ebb-42c9-92c1-d3438e39a0e1 68788b05b4719badc827ceae0f6685d4 hg38 Solid Tissue Normal C3L-07035-01
C3L-07035.RNA-Seq.R1.A C3L-07035 PDA RNA-Seq tissue_normal CPT0347850005 200731_UNC31-K00269_0286_AHHWJ2BBXY_GAATGAGA-GAGGCATT_S3_L001_R1_001.fastq.gz 4262833306 FASTQ NA 3a11d2c4-3f6d-4d93-9f48-485afc4059bb 4d52ae28806cb5f03d9a3fff565bda74 NA Solid Tissue Normal C3L-07035-01
C3L-07035.RNA-Seq.R2.A C3L-07035 PDA RNA-Seq tissue_normal CPT0347850005 200731_UNC31-K00269_0286_AHHWJ2BBXY_GAATGAGA-GAGGCATT_S3_L001_R2_001.fastq.gz 4815441455 FASTQ NA 697dbb59-0c83-4289-be41-f3804a391a4d a88b3aa93113bbb9c4a4cd77fb519508 NA Solid Tissue Normal C3L-07035-01
C3L-07035.RNA-Seq.transcriptome.A.hg38 C3L-07035 PDA RNA-Seq tissue_normal CPT0347850005 af235ec2-8e46-4903-819d-967a8f000802.rna_seq.transcriptome.gdc_realn.bam 10782705068 BAM transcriptome d930143a-35ce-4508-9415-459287e1179d 4b1f41c5454676bf803e1bb6867cdc4c hg38 Solid Tissue Normal C3L-07035-01
C3L-07036.RNA-Seq.chimeric.A.hg38 C3L-07036 PDA RNA-Seq tissue_normal CPT0347880005 db13341b-c318-48b4-b16b-b3463f0fb93f.rna_seq.chimeric.gdc_realn.bam 38992789 BAM chimeric 003aac25-0afa-4554-a582-138023c4ea72 9df7e0aabbb5a4bf17dcc33b9a3ffe0d hg38 Solid Tissue Normal C3L-07036-01
C3L-07036.RNA-Seq.genomic.A.hg38 C3L-07036 PDA RNA-Seq tissue_normal CPT0347880005 db13341b-c318-48b4-b16b-b3463f0fb93f.rna_seq.genomic.gdc_realn.bam 7426531496 BAM genomic 7c2894b1-3b3d-487a-8a0d-eadc3a44e352 c29c1cbbb24ff10ef67a09cdb51cbcb5 hg38 Solid Tissue Normal C3L-07036-01
C3L-07036.RNA-Seq.R1.A C3L-07036 PDA RNA-Seq tissue_normal CPT0347880005 200731_UNC31-K00269_0286_AHHWJ2BBXY_TGCGGCGT-CCTCGGTA_S4_L001_R1_001.fastq.gz 2990375045 FASTQ NA f9245412-081c-4289-99fb-475fac2473ee 77bc0dc4f13e87f98f147db6e8484538 NA Solid Tissue Normal C3L-07036-01
C3L-07036.RNA-Seq.R2.A C3L-07036 PDA RNA-Seq tissue_normal CPT0347880005 200731_UNC31-K00269_0286_AHHWJ2BBXY_TGCGGCGT-CCTCGGTA_S4_L001_R2_001.fastq.gz 3441842587 FASTQ NA 55668996-4f4e-4508-9152-634da507607d 8fe56d9716992ee2594dcac204c8dcb0 NA Solid Tissue Normal C3L-07036-01
C3L-07036.RNA-Seq.transcriptome.A.hg38 C3L-07036 PDA RNA-Seq tissue_normal CPT0347880005 db13341b-c318-48b4-b16b-b3463f0fb93f.rna_seq.transcriptome.gdc_realn.bam 8248662090 BAM transcriptome e90e8156-135a-4d41-8b6a-decee0bbbb01 8a91584cb6a3e4fe5199ace61d80d09e hg38 Solid Tissue Normal C3L-07036-01
C3L-07037.RNA-Seq.chimeric.A.hg38 C3L-07037 PDA RNA-Seq tissue_normal CPT0347910005 0c2673ac-0672-4841-b8c4-71fe453149b6.rna_seq.chimeric.gdc_realn.bam 148539489 BAM chimeric 4eabded0-fd50-48a3-aaf3-3b897f4c97f0 497148897dc81d05c6e5983b2b838776 hg38 Solid Tissue Normal C3L-07037-01
C3L-07037.RNA-Seq.genomic.A.hg38 C3L-07037 PDA RNA-Seq tissue_normal CPT0347910005 0c2673ac-0672-4841-b8c4-71fe453149b6.rna_seq.genomic.gdc_realn.bam 9669771486 BAM genomic 310febd2-f7a3-4987-b1a2-16af0975699c 7e6c8fe75b8ecf672785e64bed6f6ce0 hg38 Solid Tissue Normal C3L-07037-01
C3L-07037.RNA-Seq.R1.A C3L-07037 PDA RNA-Seq tissue_normal CPT0347910005 200731_UNC31-K00269_0286_AHHWJ2BBXY_CATAATAC-TTCTAACG_S2_L001_R1_001.fastq.gz 4194791505 FASTQ NA 3399328b-16f5-4c7a-8e1f-338368645ed8 3619b3194ff2aa47564da23b1342f5af NA Solid Tissue Normal C3L-07037-01
C3L-07037.RNA-Seq.R2.A C3L-07037 PDA RNA-Seq tissue_normal CPT0347910005 200731_UNC31-K00269_0286_AHHWJ2BBXY_CATAATAC-TTCTAACG_S2_L001_R2_001.fastq.gz 4651885575 FASTQ NA db70a6b8-672d-4a13-bd16-bd52d87843fe 5260fcae215a5f3e074db2f6ad879f33 NA Solid Tissue Normal C3L-07037-01
C3L-07037.RNA-Seq.transcriptome.A.hg38 C3L-07037 PDA RNA-Seq tissue_normal CPT0347910005 0c2673ac-0672-4841-b8c4-71fe453149b6.rna_seq.transcriptome.gdc_realn.bam 9423577591 BAM transcriptome a95340d8-2af7-4906-9cc6-46610a7ca991 3fb99dc7c8affa0b0710c13772102095 hg38 Solid Tissue Normal C3L-07037-01
C3N-00148.MethArray.Green.T C3N-00148 CCRCC Methylation Array tumor CPT0081600006 202184900104_R08C01_Grn.idat 13676256 IDAT Green 3fa87ccb-2393-4f48-957e-812d6cad2eae f5b972e9afbe16aa6f5ca0485164161c NA Primary Tumor C3N-00148-03
C3N-00148.MethArray.Green.T.HET_r6OkJK C3N-00148 CCRCC Methylation Array tumor CPT0081610009 204372030072_R02C01_Grn.idat 13677880 IDAT Green 605b2e6a-941f-4a09-80f6-682edbc8f380 bba8f29840919317560eea073116ea5a NA Primary Tumor C3N-00148-04 heterogeneity HET_r6OkJK Duplicate item: CCRCC Tumor heterogeneity study aliquot
C3N-00148.MethArray.Green.T.HET_r6wAGp C3N-00148 CCRCC Methylation Array tumor CPT0081590009 204367490043_R03C01_Grn.idat 13677880 IDAT Green f6eaed9e-16f0-4b1f-bb96-86a35c644127 7b1e7d7c0280478b32bcb2bdcac4ce1e NA Primary Tumor C3N-00148-02 heterogeneity HET_r6wAGp Duplicate item: CCRCC Tumor heterogeneity study aliquot
Expand Down

0 comments on commit 712a8a6

Please sign in to comment.