Skip to content

Commit

Permalink
Results of CPTAC3 discovery run 2/7/22
Browse files Browse the repository at this point in the history
  • Loading branch information
@mwyczalkowski
mwyczalkowski committed Feb 9, 2022
1 parent 62fb5e2 commit 58e8b3a
Show file tree
Hide file tree
Showing 2 changed files with 164 additions and 100 deletions.
46 changes: 23 additions & 23 deletions CPTAC3.Catalog.Summary.dat
View file
Original file line number Diff line number Diff line change
Expand Up @@ -3,31 +3,31 @@
11LU022 LUAD WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT
11LU035 LUAD WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT
C1230738 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C1245129 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C204057 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C207624 GBM WGS.hg19 N WXS.hg19 TT N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C1245129 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C204057 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C207624 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C208854 GBM WGS.hg19 TTT N WXS.hg19 TTT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C217710 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C217710 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C219555 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C223491 GBM WGS.hg19 WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C224106 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C224967 GBM WGS.hg19 WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C223491 GBM WGS.hg19 T WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C224106 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C224967 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C229764 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C231855 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C234192 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C231855 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C234192 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C2415597 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C243048 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C243909 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C247230 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C259161 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C243909 GBM WGS.hg19 TT WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C247230 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C259161 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C266664 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C283515 GBM WGS.hg19 N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C283515 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C287328 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C289419 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C298152 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C289419 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C298152 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C317832 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C330255 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C383391 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C383391 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C3L-00000 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3L-00001 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA
C3L-00002 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
Expand Down Expand Up @@ -4281,7 +4281,7 @@ C3N-05081 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq
C3N-05082 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-05083 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-05084 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-05085 LSCC WGS.hg19 N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA
C3N-05085 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA
C3N-05086 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-05087 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-05088 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
Expand Down Expand Up @@ -4396,14 +4396,14 @@ C3N-11111 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq
C3N-22222 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-33333 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C3N-44444 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C464694 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C464694 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C524103 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C621273 GBM WGS.hg19 WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C685110 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C760878 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C621273 GBM WGS.hg19 N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray
C685110 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C760878 GBM WGS.hg19 TT WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C761370 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C827913 GBM WGS.hg19 T N WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C846363 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C827913 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
C846363 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT
GTEX-NPJ7-0011-R10A-SM-HAKXW GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq A WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 A MethArray
GTEX-P44H-0011-R10A-SM-HAKXX GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq A WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 A MethArray
PT-Q2AG GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray
Expand Down
Loading

0 comments on commit 58e8b3a

Please sign in to comment.