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AMICI v0.33.0
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@dweindl dweindl released this 11 Jun 20:46
v0.33.0
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Learn about vigilant mode.

Note that this release requires Python >= 3.11.

Fixes

  • Fixed an issue in SBML AlgebraicRule processing leading to import failure if a species occurred in multiple AlgebraicRules

    by @dweindl in #2744

  • Fixed a potential segfault when running forward sensitivity analysis for models without state variables

    by @FFroehlich in #2749

  • Fixed a dimension bug for presimulation parameters in ExpDataView

    by @FFroehlich in #2746

  • Fixed incorrect initialization for initial assignments with explicit time dependence

    by @dweindl in #2779

Features

  • AMICI now supports SBML events with use_values_from_trigger_time=true

    by @dweindl in #2741

  • AMICI now supports SBML events with constant priorities

    by @dweindl in #2730

Other changes

  • doc: Added a caveats section listing some known issues and potentially unexpected behavior in AMICI

    by @dweindl in #2735

  • Added warnings for presimulation and steady state simulation with events. So far, events were not fully supported in these modes. This is subject to change.

    by @dweindl in #2755

Full Changelog: v0.32.0...v0.33.0

Contributors

FFroehlich and dweindl
Assets 2
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