Skip to content

Auto update dev-preindustrial+concentrations to use access-esm1p5/pr46-2 #143

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
access-bot wants to merge 1 commit into
base: dev-preindustrial+concentrations
Choose a base branch
from
+80 −81
Draft

Auto update dev-preindustrial+concentrations to use access-esm1p5/pr46-2 #143

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
161 changes: 80 additions & 81 deletions config.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -24,115 +24,114 @@ jobfs: 1500MB
# Modules for loading model executables
modules:
use:
- /g/data/vk83/modules
- /g/data/vk83/modules
- /g/data/vk83/prerelease/modules
load:
- access-esm1p5/2024.12.1

# Model configuration
- access-esm1p5/pr46-2
model: access

submodels:
- name: atmosphere
model: um
ncpus: 240
exe: um_hg3.exe
input:
- name: atmosphere
model: um
ncpus: 240
exe: um_hg3.exe
input:
# Aerosols
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/OCFF_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/BC_hi_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/scycl_1850_ESM1_v4.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/Bio_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/biogenic_351sm.N96L38
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/sulpc_oxidants_N96_L38
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/DMS_conc.N96
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/OCFF_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/BC_hi_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/scycl_1850_ESM1_v4.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/aerosol/global.N96/2020.05.19/Bio_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/biogenic_351sm.N96L38
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/sulpc_oxidants_N96_L38
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/DMS_conc.N96
# Forcing
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/forcing/global.N96/2020.05.19/ozone_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/forcing/resolution_independent/2020.05.19/volcts_18502000ave.dat
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/forcing/global.N96/2020.05.19/ozone_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/forcing/resolution_independent/2020.05.19/volcts_18502000ave.dat
# Land
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/land/biogeochemistry/global.N96/2020.05.19/Ndep_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/soiltype/global.N96/2020.05.19/qrparm.soil_igbp_vg
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/vegetation/global.N96/2020.05.19/cable_vegfunc_N96.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeochemistry/resolution_independent/2020.05.19/modis_phenology_csiro.txt
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeochemistry/resolution_independent/2020.05.19/pftlookup_csiro_v16_17tiles_wtlnds.csv
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeophysics/resolution_independent/2020.05.19/def_soil_params.txt
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeophysics/resolution_independent/2020.05.19/def_veg_params.txt
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/atmosphere/land/biogeochemistry/global.N96/2020.05.19/Ndep_1850_ESM1.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/soiltype/global.N96/2020.05.19/qrparm.soil_igbp_vg
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/vegetation/global.N96/2020.05.19/cable_vegfunc_N96.anc
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeochemistry/resolution_independent/2020.05.19/modis_phenology_csiro.txt
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeochemistry/resolution_independent/2020.05.19/pftlookup_csiro_v16_17tiles_wtlnds.csv
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeophysics/resolution_independent/2020.05.19/def_soil_params.txt
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/land/biogeophysics/resolution_independent/2020.05.19/def_veg_params.txt
# Spectral
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_sw_hadgem1_6on
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_lw_hadgem1_6on
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_sw_hadgem1_6on
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_lw_hadgem1_6on
# Grids
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/grids/global.N96/2020.05.19/qrparm.mask
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/grids/resolution_independent/2020.05.19/vertlevs_G3
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/grids/global.N96/2020.05.19/qrparm.mask
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/grids/resolution_independent/2020.05.19/vertlevs_G3
# STASH
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/stash/2024.11.01
- /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/stash/2024.11.01

- name: ocean
model: mom
ncpus: 180
exe: fms_ACCESS-CM.x
input:
- name: ocean
model: mom
ncpus: 180
exe: fms_ACCESS-CM.x
input:
# Biogeochemistry
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/dust.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/share/ocean/biogeochemistry/global.1deg/2024.07.12/bgc_param.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/dust.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/share/ocean/biogeochemistry/global.1deg/2024.07.12/bgc_param.nc
# Tides
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/tideamp.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/tideamp.nc
# Shortwave
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/shortwave_penetration/global.1deg/2025.06.23/ssw_atten_depth.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/shortwave_penetration/global.1deg/2025.06.23/ssw_atten_depth.nc
# Grids
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/grids/mosaic/global.1deg/2020.05.19/grid_spec.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/grids/mosaic/global.1deg/2020.05.19/grid_spec.nc
# Basin mask
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/basins/global.1deg/2020.05.19/basin_mask.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/basins/global.1deg/2020.05.19/basin_mask.nc

- name: ice
model: cice
ncpus: 12
exe: cice_access_360x300_12x1_12p.exe
input:
- name: ice
model: cice
ncpus: 12
exe: cice_access_360x300_12x1_12p.exe
input:
# Grids
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/grids/global.1deg/2020.05.19/kmt.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/grids/global.1deg/2020.05.19/grid.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/grids/global.1deg/2020.05.19/kmt.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/grids/global.1deg/2020.05.19/grid.nc
# Climatology
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/climatology/global.1deg/2020.05.19/monthly_sstsss.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ice/climatology/global.1deg/2020.05.19/monthly_sstsss.nc

- name: coupler
model: oasis
ncpus: 0
input:
- name: coupler
model: oasis
ncpus: 0
input:
# Grids
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/grids.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/areas.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/masks.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/grids.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/areas.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/masks.nc
# Remapping weights
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1t_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1u_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1t_to_cice_CONSERV_DESTAREA.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1u_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1v_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1t_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1v_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1t_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1u_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1t_to_cice_CONSERV_DESTAREA.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1u_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1v_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_um1t_to_cice_CONSERV_FRACNNEI.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2020.05.19/rmp_cice_to_um1v_CONSERV_FRACNNEI.nc

# Collation
collate:
exe: mppnccombine.spack
restart: true
mem: 4GB
walltime: 1:00:00
mpi: false
exe: mppnccombine.spack
restart: true
mem: 4GB
walltime: 1:00:00
mpi: false

restart: /g/data/vk83/configurations/inputs/access-esm1p5/modern/pre-industrial/restart/

# Timing controls
calendar:
start:
year: 101
month: 1
days: 1
start:
year: 101
month: 1
days: 1

runtime:
years: 1
months: 0
days: 0
runtime:
years: 1
months: 0
days: 0

runspersub: 1

Expand All @@ -142,7 +141,7 @@ restart_freq: 10YS
runlog: true
manifest:
reproduce:
exe: True
exe: false

payu_minimum_version: 1.1.6
stacksize: unlimited
Expand All @@ -152,8 +151,8 @@ qsub_flags: -W umask=027
# Sync options for automatically copying data from ephemeral scratch space to
# longer term storage
sync:
enable: False # set path below and change to true
path: null # Set to location on /g/data or a remote server and path (rsync syntax)
enable: false # set path below and change to true
path: null # Set to location on /g/data or a remote server and path (rsync syntax)

# If a postscript included (such as the automated netcdf conversion), the latest output and restart files will not
# be automatically synced at the end of a run. To sync the latest output after a postscript has completed,
Expand Down
Loading