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细胞数的统计 #75

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GengY-sdu opened this issue Nov 8, 2024 · 1 comment
Open

细胞数的统计 #75

GengY-sdu opened this issue Nov 8, 2024 · 1 comment

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@GengY-sdu
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GengY-sdu commented Nov 8, 2024

您好,请问ARGs-OAP 3.0对于细胞数的统计是采用了和之前版本不同的方式嘛?在之前版本中我看还需要与16S rRNA 基因超可变区数据库进行比对,然后再使用CopyRighter数据库进行校正(上图)。在3.0版本我看只与ko30.fasta文件进行了比对(下图)。

期待您的回复,谢谢!

Snipaste_2024-11-08_11-11-48
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Snipaste_2024-11-08_11-11-19

@GengY-sdu GengY-sdu changed the title 细胞数的标准化 细胞数的统计 Nov 8, 2024
@xinehc
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xinehc commented Nov 9, 2024

Cell numbers are currently estimated using 30 single-copy marker genes. The previous version used 16S copies + copyrighter for correction.

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