Hello Wei,
Running the MARVEL package using the droplet method on the data provided by the package.
Getting this error for Locate SJ Position foradhocGene.PlotSJPosition.10xcommand.
marvel <- adhocGene.PlotSJPosition.10x(MarvelObject=marvel,
coord.intron=coord.intron,
rescale_introns=FALSE,
show.protein.coding.only=TRUE,
anno.label.size=1.5,
anno.colors = c("black", "red", "blue")
)
Retrieving transcripts from GTF file...
11 transcripts identified
Error in wiggleplotr::plotTranscripts(exons = grange.exon.list, cdss = grange.cds.list, :
unused arguments (anno.colors = anno.colors, anno.label.size = anno.label.size)
Looked into the wiggleplotr::plotTranscripts function and it looks like it does not take anno.colors amd anno.label.size arguments.
Is this something you guys came across as well? If so, any idea how to get a way around this.
Running on Ubuntu OS.
Thanks!!
Hello Wei,
Running the MARVEL package using the droplet method on the data provided by the package.
Getting this error for Locate SJ Position for
adhocGene.PlotSJPosition.10xcommand.Looked into the wiggleplotr::plotTranscripts function and it looks like it does not take
anno.colorsamdanno.label.sizearguments.Is this something you guys came across as well? If so, any idea how to get a way around this.
Running on Ubuntu OS.
Thanks!!