Adding the new Fenix-fortified codes to the standard Maekfile and the sample run script.

Author: rfvander

Makefile

@@ -95,6 +95,9 @@ allmpi1:
 allfenix:
 	cd scripts/small;            $(MAKE) -f  Makefile_FENIX runfenix
 	cd FENIX/Stencil;            $(MAKE) stencil   "DEFAULT_OPT_FLAGS   = $(PRK_FLAGS)"
+	cd FENIX/AMR;                $(MAKE) amr       "DEFAULT_OPT_FLAGS   = $(PRK_FLAGS)"
+	cd FENIX/Synch_p2p;          $(MAKE) p2p       "DEFAULT_OPT_FLAGS   = $(PRK_FLAGS)"
+	cd FENIX/Transpose;          $(MAKE) transpose "DEFAULT_OPT_FLAGS   = $(PRK_FLAGS)"
 
 allampi:
 	cd AMPI/Synch_global;        $(MAKE) global    "DEFAULT_OPT_FLAGS   = $(PRK_FLAGS)"

scripts/small/runfenix.in

@@ -2,8 +2,11 @@ NUMPROCS=6
 NUMSPARES=2
 NUMITERS=10
 NUMKILLS=1
-FREQ=7
+FREQ=4
 SEPLINE="==============================================================="
 MPIRUN=mpirun
 
-$MPIRUN -am ft-enable-mpi -np $NUMPROCS FENIX/Stencil/stencil  $NUMITERS 1000 $NUMSPARES $NUMKILLS $FREQ 0;                                 echo $SEPLINE
+$MPIRUN -am ft-enable-mpi -bind-to-core -np $NUMPROCS FENIX/Stencil/stencil     $NUMITERS 1000              $NUMSPARES $NUMKILLS $FREQ 0;  echo $SEPLINE
+$MPIRUN -am ft-enable-mpi -bind-to-core -np $NUMPROCS FENIX/AMR/amr             $NUMITERS 1000 100 1 20 5 1 $NUMSPARES $NUMKILLS $FREQ 0;  echo $SEPLINE
+$MPIRUN -am ft-enable-mpi -bind-to-core -np $NUMPROCS FENIX/Transpose/transpose $NUMITERS 1000              $NUMSPARES $NUMKILLS $FREQ 0;  echo $SEPLINE
+$MPIRUN -am ft-enable-mpi -bind-to-core -np $NUMPROCS FENIX/Synch_p2p/p2p       $NUMITERS 1000 1000         $NUMSPARES $NUMKILLS $FREQ 0; echo $SEPLINE