docs: clarify pnpm runtime management conflicts #14269

Job	Run time
optimize-ci	3s
detect-changes	3s
Docs format check	1m 18s
Test (Linux x64 musl)	-1s
Cert-less image E2E test	-1s
Test	-1s
download-previous-rolldown-binaries	-1s
done	3s
Build Windows tests	-1s
Lint	-1s
Local CLI `vp install` E2E test	0s
Build Windows CLI binaries	-1s
Test (Windows)	0s
CLI snapshot test (Windows)	0s
CLI E2E test (Linux x64 musl)	0s
CLI snapshot test (${{ matrix.target }})	0s
CLI E2E test	0s
Local CLI `vp install` E2E test (Socket Firewall Free)	0s
	1m 20s

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