From def1c35a748506fe6668115a41f5d7b994bfbbf0 Mon Sep 17 00:00:00 2001
From: Xian <xhchang@ucsc.edu>
Date: Wed, 27 Nov 2024 11:13:43 +0100
Subject: [PATCH] Add unused option to only store distances along the top-level
 chain

---
 bdsg/include/bdsg/snarl_distance_index.hpp | 1 +
 1 file changed, 1 insertion(+)

diff --git a/bdsg/include/bdsg/snarl_distance_index.hpp b/bdsg/include/bdsg/snarl_distance_index.hpp
index 66c2e695..569a1b12 100644
--- a/bdsg/include/bdsg/snarl_distance_index.hpp
+++ b/bdsg/include/bdsg/snarl_distance_index.hpp
@@ -906,6 +906,7 @@ class SnarlDistanceIndex : public SnarlDecomposition, public TriviallySerializab
     
 public:
     void set_snarl_size_limit (size_t size) {snarl_size_limit=size;}
+    void set_only_top_level_chain_distances (bool only_chain) {only_top_level_chain_distances=only_chain;}