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donglab_workflows

Image registration workflows as part of Next Generation MORF BRAIN Initiative Project

Algorithms use GPU parallelization enabled by the pytorch library.

todo: finalize code into a series of scripts. include instructions for setting up vertual env with all requirements

need: required specifications for interfacing with necessary outputs.

Daniel's plan

start with jupyter notebooks, then turn them into scripts to be run by other users on a cluster.

Functions will move to an importable library.

This is in the twardlab organization, but can be forked elsewhere.