Use latest GHA workflows

Author: gaborcsardi

.github/workflows/R-CMD-check.yaml

@@ -10,7 +10,7 @@ on:
   pull_request:
     branches: [main, master]
 
-name: R-CMD-check
+name: R-CMD-check.yaml
 
 permissions: read-all
 
@@ -27,8 +27,8 @@ jobs:
           - {os: macos-latest,   r: 'release'}
 
           - {os: windows-latest, r: 'release'}
-          # use 4.1 to check with rtools40's older compiler
-          - {os: windows-latest, r: '4.1'}
+          # use 4.0 or 4.1 to check with rtools40's older compiler
+          - {os: windows-latest, r: 'oldrel-4'}
 
           - {os: ubuntu-latest,  r: 'devel', http-user-agent: 'release'}
           - {os: ubuntu-latest,  r: 'release'}

.github/workflows/pkgdown.yaml

@@ -9,7 +9,7 @@ on:
     types: [published]
   workflow_dispatch:
 
-name: pkgdown
+name: pkgdown.yaml
 
 permissions: read-all
 

.github/workflows/pr-commands.yaml

@@ -4,7 +4,7 @@ on:
   issue_comment:
     types: [created]
 
-name: Commands
+name: pr-commands.yaml
 
 permissions: read-all
 
@@ -15,6 +15,8 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
       - uses: actions/checkout@v4
 
@@ -52,6 +54,8 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
       - uses: actions/checkout@v4
 

.github/workflows/test-coverage.yaml

@@ -6,7 +6,7 @@ on:
   pull_request:
     branches: [main, master]
 
-name: test-coverage
+name: test-coverage.yaml
 
 permissions: read-all