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check

build: lower Go requirement to 1.24 #24

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	name: check

	on:
	push:
	branches:
	- 'main'
	pull_request:
	branches:
	- 'main'

	env:
	NODE_VERSION: '24'
	PYTHON_VERSION: '3.14'

	permissions:
	contents: read

	jobs:
	c:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: install dependencies
	run: sudo apt install -y lcov astyle cppcheck clang-tidy
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd c && make clean version linter coverage sanitize build
	#- name: coverage report
	# uses: coverallsapp/github-action@v2
	# with:
	# format: lcov
	# file: c/target/test/coverage/variantkey.info

	# The main "c" job builds with gcc on x86-64. The two jobs below add clang,
	# which enables warnings gcc does not, and a 32-bit build, which catches shifts
	# and printf formats that are only wrong where size_t is not 64 bit.
	c-clang:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: install dependencies
	run: sudo apt install -y clang
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: build and run the tests with clang
	# "make build", not "make test": the test target captures coverage with
	# lcov, which cannot read the .gcno files clang produces. The build
	# target compiles with the full warning set and runs the ctest suite.
	run: cd c && make clean build CC=clang

	c-m32:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: install dependencies
	run: sudo apt install -y gcc-multilib
	- name: compile the headers and the tests as 32 bit
	# Compile-only check: a full 32-bit test run would need the whole
	# toolchain multilib. It catches shift width and -Wformat mismatches on
	# size_t and uint64_t.
	run: \|
	cd c
	for h in src/variantkey/*.h; do
	gcc -m32 -std=c17 -pedantic -Wall -Wextra -Wformat -Werror -c -x c "$h" -o /dev/null
	done
	# test_binsearch*.c are imported verbatim from the binsearch repository
	# and use %lu for uint64_t, which is only correct on LP64. They are
	# excluded here because they must not be edited in this repository.
	for t in $(ls test/test_*.c \| grep -v test_binsearch); do
	gcc -m32 -std=c17 -Wall -Wextra -Wformat -Werror -c "$t" -o /dev/null
	done

	go:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: setup go build environment
	uses: actions/setup-go@v7
	with:
	go-version-file: 'go.mod'
	check-latest: true
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd go && make mod deps linter test GOPATH=$(go env GOPATH)

	javascript:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: setup node build environment
	uses: actions/setup-node@v6
	with:
	node-version: ${{ env.NODE_VERSION }}
	- name: install dependencies
	run: npm install --global uglify-js js-beautify
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd javascript && make build

	python:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: setup python build environment
	uses: actions/setup-python@v7
	with:
	python-version: ${{ env.PYTHON_VERSION }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install --upgrade setuptools virtualenv
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd python && make all
	# The C headers live outside the package and have to be staged into it, so
	# the built tarball is installed from a scratch directory to check that the
	# source distribution is complete.
	- name: install from the source distribution
	run: \|
	cd python && make build
	cd "$(mktemp -d)"
	python -m venv v
	./v/bin/pip install "$GITHUB_WORKSPACE"/python/dist/variantkey-*.tar.gz
	./v/bin/python -c "import variantkey as vk; assert vk.variantkey(b'X', 12345, b'AC', b'GT') == 0xb800181c910d8000"

	python-class:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: setup python build environment
	uses: actions/setup-python@v7
	with:
	python-version: ${{ env.PYTHON_VERSION }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install --upgrade setuptools virtualenv
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd python-class && make all

	r:
	runs-on: ubuntu-latest
	steps:
	- name: checkout repository
	uses: actions/checkout@v7
	- name: setup R build environment
	uses: r-lib/actions/setup-r@v2
	- name: Install dependencies
	uses: r-lib/actions/setup-r-dependencies@v2
	with:
	working-directory: './r/variantkey/'
	cache-version: 2
	- name: set RELEASE number
	run: echo ${GITHUB_RUN_NUMBER} > RELEASE
	- name: test
	run: cd r && make build test
	- name: install from the package tarball
	run: \|
	mkdir -p "$HOME/rlib"
	R CMD INSTALL -l "$HOME/rlib" r/variantkey_*.tar.gz

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build: lower Go requirement to 1.24 #24

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build: lower Go requirement to 1.24 #24

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