Skip to content

Latest commit

 

History

History
19 lines (11 loc) · 1.01 KB

README.md

File metadata and controls

19 lines (11 loc) · 1.01 KB

Snakemake workflow: transdecoder-smk

Snakemake GitHub actions status

A Snakemake workflow for ORF prediction with transdecoder.

Usage

Used to predict ORFs from guided, de novo transcript assemblies form ONT or ILL rnaseq data.

TODO

  • Replace <owner> and <repo> everywhere in the template (also under .github/workflows) with the correct <repo> name and owning user or organization.
  • Replace <name> with the workflow name (can be the same as <repo>).
  • Replace <description> with a description of what the workflow does.
  • The workflow will occur in the snakemake-workflow-catalog once it has been made public. Then the link under "Usage" will point to the usage instructions if <owner> and <repo> were correctly set.