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Index supporting overlap queries #23

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jeromekelleher opened this issue May 23, 2024 · 1 comment
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Index supporting overlap queries #23

jeromekelleher opened this issue May 23, 2024 · 1 comment

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@jeromekelleher
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We have no equivalent of the interval overlap query that htslib supports with CSI and Tabix indexes. Is this an important piece of functionality, or is searching by start position sufficient?

Related: #21
@jeromekelleher jeromekelleher mentioned this issue Jul 11, 2024
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@jeromekelleher jeromekelleher mentioned this issue Jul 22, 2024
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@tomwhite
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tomwhite commented Mar 3, 2025 •
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Closing this since we now support regions in vcztools: sgkit-dev/vcztools#16 and linked PRs. Also see #33.

@tomwhite tomwhite closed this as completed Mar 3, 2025
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@tomwhite @jeromekelleher