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Issues list

split freebayes
#31 opened Feb 27, 2025 by cokelaer updated Feb 27, 2025
implement bwa_split
#30 opened Feb 27, 2025 by cokelaer updated Feb 27, 2025
if coverage and snpeff are off, multiqc fails because
#29 opened Feb 6, 2025 by cokelaer updated Feb 6, 2025
genome and annotation must have the same basename, error is raised if not
#28 opened Jan 30, 2025 by cokelaer updated Jan 30, 2025
in rare occassion genomecov does not sort properly the chromosomes bug Something isn't working
#27 opened Jul 5, 2024 by cokelaer updated Jul 5, 2024
if input is made of BAM, the readtag should be unset enhancement New feature or request
#26 opened May 28, 2024 by cokelaer updated May 28, 2024
planned improvements enhancement New feature or request
#1 opened Feb 20, 2020 by cokelaer updated Dec 3, 2023
4 of 8 tasks
implement better summary enhancement New feature or request
#3 opened Jul 8, 2021 by cokelaer updated Jul 26, 2023
1 of 5 tasks
consider implementated features found in this reference (strand bias) enhancement New feature or request
#2 opened Mar 16, 2021 by cokelaer updated Feb 16, 2022
ProTip! Follow long discussions with comments:>50.