Move workshops into new dir. Add index for SciPy2018.

Author: stefanv

check_setup.py

@@ -1,4 +1,5 @@
 import sys
+import os
 from distutils.version import LooseVersion
 
 if sys.version_info.major < 3:
@@ -7,7 +8,7 @@
 
     sys.exit(1)
 
-with open('requirements.txt') as f:
+with open(os.path.join(os.path.dirname(__file__), 'requirements.txt')) as f:
     reqs = f.readlines()
 
 reqs = [(pkg, ver) for (pkg, _, ver) in
@@ -39,4 +40,3 @@
     print('[{}] {:<11} {}'.format(
         status, pkg.ljust(13), version_installed)
         )
-

index.ipynb

@@ -13,11 +13,9 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "# Conferences\n",
+    "# Events\n",
     "\n",
-    "- [SciPy 2014](2014-scipy/000_index.ipynb)\n",
-    "- [EuroSciPy 2014](2014-euroscipy/index.ipynb)\n",
-    "- [SciPy 2015](2015-scipy/index.ipynb)"
+    "[Workshop teaching schedules](workshop/)"
    ]
   },
   {
@@ -34,23 +32,23 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 2",
+   "display_name": "Python 3",
    "language": "python",
-   "name": "python2"
+   "name": "python3"
   },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
-    "version": 2
+    "version": 3
    },
    "file_extension": ".py",
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.9"
+   "pygments_lexer": "ipython3",
+   "version": "3.6.6rc1"
   }
  },
  "nbformat": 4,
- "nbformat_minor": 0
+ "nbformat_minor": 1
 }

lectures/00_images_are_arrays.ipynb

@@ -8,7 +8,13 @@
     "To participate, you'll need to git clone (or download the .zip from GitHub):\n",
     "\n",
     "<p>https://github.com/scikit-image/skimage-tutorials</p>\n",
+    "</div>\n",
     "\n",
+    "<p>You can do that in git using:</p>\n",
+    "\n",
+    "<pre>git clone --depth=1 https://github.com/scikit-image/skimage-tutorials</pre>\n",
+    "\n",
+    "<div style='font-size: 200%; line-height: 1.5;'>\n",
     "If you have already cloned the material, please issue `git pull` now and reload the notebook to ensure that you have the latest updates.\n",
     "</div>"
    ]

2014-euroscipy/index.ipynb renamed to workshops/2014-euroscipy/index.ipynb

@@ -49,13 +49,13 @@
     "\n",
     "For convenience, we have divided this tutorial into several chapters, linked below. Throughout the tutorials, feel free to ask questions. We want you to come away confident in your image analysis skills!\n",
     "\n",
-    "- [Images are just numpy arrays](../lectures/00_images_are_arrays.ipynb)\n",
-    "- [Color and exposure](../lectures/0_color_and_exposure.ipynb) [briefly cover]\n",
-    "- [Segmentation](../lectures/4_segmentation.ipynb)\n",
-    "- [Real world example: panorama stitching](../lectures/example_pano.ipynb)\n",
+    "- [Images are just numpy arrays](../../lectures/00_images_are_arrays.ipynb)\n",
+    "- [Color and exposure](../../lectures/0_color_and_exposure.ipynb) [briefly cover]\n",
+    "- [Segmentation](../../lectures/4_segmentation.ipynb)\n",
+    "- [Real world example: panorama stitching](../../lectures/example_pano.ipynb)\n",
     "- Exercises and further demos, if there's time\n",
     "\n",
-    "More lectures [here](../lectures) and [here](http://scipy-lectures.github.io).\n",
+    "More lectures [here](../../lectures) and [here](http://scipy-lectures.github.io).\n",
     "\n",
     "## Improv time!\n",
     "\n",
@@ -70,152 +70,27 @@
     "- [Contribute!](https://github.com/scikit-image/scikit-image/blob/master/CONTRIBUTING.txt)\n",
     "- If you find it useful: cite [our paper](https://peerj.com/articles/453/)!"
    ]
-  },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "---\n",
-    "\n",
-    "<div style=\"height: 400px;\"></div>"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 6,
-   "metadata": {
-    "collapsed": false
-   },
-   "outputs": [
-    {
-     "data": {
-      "text/html": [
-       "<style>\n",
-       ".rendered_html {\n",
-       "    font-family: Georgia, serif;\n",
-       "    font-size: 130%;\n",
-       "    line-height: 1.5;\n",
-       "}\n",
-       "\n",
-       ".input {\n",
-       "    width: 930px;\n",
-       "}\n",
-       "\n",
-       ".inner_cell {\n",
-       "    width: 800px;\n",
-       "}\n",
-       "\n",
-       ".code_cell {\n",
-       "    width: 800px;\n",
-       "}\n",
-       "\n",
-       ".CodeMirror-sizer {\n",
-       "}\n",
-       "\n",
-       "hr {\n",
-       "    border: 1px solid #DDD;\n",
-       "}\n",
-       "\n",
-       ".rendered_html h1 {\n",
-       "    margin: 0.25em 0em 0.5em;\n",
-       "    font-family: sans-serif;\n",
-       "    color: #015C9C;\n",
-       "    text-align: center;\n",
-       "    line-height: 1.2;\n",
-       "    page-break-before: always;\n",
-       "}\n",
-       "\n",
-       ".rendered_html h2 {\n",
-       "    margin: 1.1em 0em 0.5em;\n",
-       "    font-family: sans-serif;\n",
-       "    color: #26465D;\n",
-       "    line-height: 1.2;\n",
-       "}\n",
-       "\n",
-       ".rendered_html h3 {\n",
-       "    font-family: sans-serif;\n",
-       "    margin: 1.1em 0em 0.5em;\n",
-       "    color: #002845;\n",
-       "    line-height: 1.2;\n",
-       "}\n",
-       "\n",
-       ".rendered_html li {\n",
-       "    line-height: 1.5;\n",
-       "}\n",
-       "\n",
-       ".CodeMirror-lines {\n",
-       "    font-size: 110%;\n",
-       "    line-height: 1.4em;\n",
-       "    font-family: DejaVu Sans Mono, Consolas, Ubuntu, monospace;\n",
-       "}\n",
-       "\n",
-       "h1.bigtitle {\n",
-       "    margin: 4cm 1cm 4cm 1cm;\n",
-       "    font-size: 300%;\n",
-       "}\n",
-       "\n",
-       "h3.point {\n",
-       "    font-size: 200%;\n",
-       "    text-align: center;\n",
-       "    margin: 2em 0em 2em 0em;\n",
-       "    #26465D\n",
-       "}\n",
-       "\n",
-       ".logo {\n",
-       "    margin: 20px 0 20px 0;\n",
-       "}\n",
-       "\n",
-       "a.anchor-link {\n",
-       "    display: none;\n",
-       "}\n",
-       "\n",
-       "h1.title {\n",
-       "    font-size: 250%;\n",
-       "}\n",
-       "\n",
-       ".exercize {\n",
-       "    color: #738;\n",
-       "}\n",
-       "\n",
-       "h2 .exercize {\n",
-       "    font-style: italic;\n",
-       "}\n",
-       "\n",
-       "</style>"
-      ],
-      "text/plain": [
-       "<IPython.core.display.HTML object>"
-      ]
-     },
-     "metadata": {},
-     "output_type": "display_data"
-    }
-   ],
-   "source": [
-    "%reload_ext load_style\n",
-    "%load_style ../themes/tutorial.css"
-   ]
   }
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 2",
+   "display_name": "Python 3",
    "language": "python",
-   "name": "python2"
+   "name": "python3"
   },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
-    "version": 2
+    "version": 3
    },
    "file_extension": ".py",
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.9"
+   "pygments_lexer": "ipython3",
+   "version": "3.6.6rc1"
   }
  },
  "nbformat": 4,
- "nbformat_minor": 0
+ "nbformat_minor": 1
 }

2014-euroscipy/load_style.py renamed to workshops/2014-euroscipy/load_style.py

@@ -56,14 +56,14 @@
     "\n",
     "For convenience, we have divided this tutorial into several chapters, linked below. Throughout the tutorials, feel free to ask questions. We want you to come away confident in your image analysis skills!\n",
     "\n",
-    "- [Images are just NumPy arrays](../lectures/00_images_are_arrays.ipynb)\n",
-    "- [Color and exposure](../lectures/0_color_and_exposure.ipynb)\n",
-    "- [Image filters](../lectures/1_image_filters.ipynb)\n",
-    "- [Feature detection](../lectures/2_feature_detection.ipynb)\n",
-    "- [Morphological operations](../lectures/3_morphological_operations.ipynb)\n",
-    "- [Segmentation](../lectures/4_segmentation.ipynb)\n",
-    "- [Advanced example: measuring fluorescence intensity on chromosomes](../lectures/adv0_chromosomes.ipynb)\n",
-    "- [Advanced example: measuring intensity along a microscopy image](../lectures/adv1-lesion-quantification.ipynb)\n",
+    "- [Images are just NumPy arrays](../../lectures/00_images_are_arrays.ipynb)\n",
+    "- [Color and exposure](../../lectures/0_color_and_exposure.ipynb)\n",
+    "- [Image filters](../../lectures/1_image_filters.ipynb)\n",
+    "- [Feature detection](../../lectures/2_feature_detection.ipynb)\n",
+    "- [Morphological operations](../../lectures/3_morphological_operations.ipynb)\n",
+    "- [Segmentation](../../lectures/4_segmentation.ipynb)\n",
+    "- [Advanced example: measuring fluorescence intensity on chromosomes](../../lectures/adv0_chromosomes.ipynb)\n",
+    "- [Advanced example: measuring intensity along a microscopy image](../../lectures/adv1-lesion-quantification.ipynb)\n",
     "\n",
     "# Improv time!\n",
     "\n",
@@ -82,23 +82,23 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 2",
+   "display_name": "Python 3",
    "language": "python",
-   "name": "python2"
+   "name": "python3"
   },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
-    "version": 2
+    "version": 3
    },
    "file_extension": ".py",
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.9"
+   "pygments_lexer": "ipython3",
+   "version": "3.6.6rc1"
   }
  },
  "nbformat": 4,
- "nbformat_minor": 0
+ "nbformat_minor": 1
 }