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lines changed Original file line number Diff line number Diff line change @@ -44,10 +44,11 @@ Public omics data from UCSC Xena are supported through [**multiple turn-key Xena
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## Installation
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- Install stable release from CRAN with:
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+ Install stable release from r-universe/ CRAN with:
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``` {r, eval=FALSE}
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- install.packages("UCSCXenaTools")
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+ install.packages('UCSCXenaTools', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))
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+ #install.packages("UCSCXenaTools")
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```
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You can also install devel version of ** UCSCXenaTools** from github with:
Original file line number Diff line number Diff line change @@ -40,10 +40,11 @@ this package?**
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## Installation
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- Install stable release from CRAN with:
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+ Install stable release from r-universe/ CRAN with:
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``` r
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- install.packages(" UCSCXenaTools" )
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+ install.packages(' UCSCXenaTools' , repos = c(' https://ropensci.r-universe.dev' , ' https://cloud.r-project.org' ))
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+ # install.packages("UCSCXenaTools")
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```
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You can also install devel version of ** UCSCXenaTools** from github
@@ -172,7 +173,7 @@ Query and download.
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XenaQuery(df_todo ) %> %
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XenaDownload() - > xe_download
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# > This will check url status, please be patient.
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- # > All downloaded files will under directory /tmp/RtmpyHpIIe .
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+ # > All downloaded files will under directory /tmp/RtmpYsoGw3 .
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# > The 'trans_slash' option is FALSE, keep same directory structure as Xena.
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# > Creating directories for datasets...
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# > Downloading TCGA.LUNG.sampleMap/LUNG_clinicalMatrix
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