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CITATION.cff
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# -----------------------------------------------------------
# CITATION file created with {cffr} R package, v0.2.2
# See also: https://docs.ropensci.org/cffr/
# -----------------------------------------------------------
cff-version: 1.2.0
message: 'To cite package "ReLTER" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'ReLTER: An Interface for the eLTER Community (v2.1)'
version: 2.1.1
doi: 10.5281/zenodo.5576813
date-released: 2023-01-30
abstract: 'ReLTER provides access to DEIMS-SDR (https://deims.org/), and allows interaction
with data and software implemented by eLTER Research Infrastructure (RI) thus improving
data sharing among European LTER projects. ReLTER uses the R language to access
and interact with the DEIMS-SDR archive of information shared by the Long Term Ecological
Research (LTER) network. This package grew within eLTER H2020 as a major project
that will help advance the development of European Long-Term Ecosystem Research
Infrastructures (eLTER RI - https://elter-ri.eu). The ReLTER package functions in
particular allow to: - retrieve the information about entities (e.g. sites, datasets,
and activities) shared by DEIMS-SDR (see e.g. get_site_info function); - interact
with the [ODSEurope](maps.opendatascience.eu) starting with the dataset shared by
[DEIMS-SDR](https://deims.org/) (see e.g. [get_site_ODS](https://docs.ropensci.org/ReLTER/reference/get_site_ODS.html)
function); - use the eLTER site informations to download and crop geospatial data
from other platforms (see e.g. get_site_ODS function); - improve the quality of
the dataset (see e.g. get_id_worms). Functions currently implemented are derived
from discussions of the needs among the eLTER users community. The ReLTER package
will continue to follow the progress of eLTER-RI and evolve, adding new tools and
improvements as required.'
authors:
- family-names: Oggioni
given-names: Alessandro
email: [email protected]
orcid: https://orcid.org/0000-0002-7997-219X
- family-names: Silver
given-names: Micha
email: [email protected]
orcid: https://orcid.org/0000-0002-1128-1325
- family-names: Tagliolato
given-names: Paolo
email: [email protected]
orcid: https://orcid.org/0000-0002-0261-313X
- family-names: Ranghetti
given-names: Luigi
email: [email protected]
orcid: https://orcid.org/0000-0001-6207-5188
preferred-citation:
type: generic
title: 'ReLTER: An Interface for the eLTER Community (v2.1)'
authors:
- family-names: Oggioni
given-names: Alessandro
email: [email protected]
orcid: https://orcid.org/0000-0002-7997-219X
- family-names: Silver
given-names: Micha
email: [email protected]
orcid: https://orcid.org/0000-0002-1128-1325
- family-names: Ranghetti
given-names: Luigi
email: [email protected]
orcid: https://orcid.org/0000-0001-6207-5188
- family-names: Tagliolato
given-names: Paolo
email: [email protected]
orcid: https://orcid.org/0000-0002-0261-313X
year: '2023'
notes: R package version v2.1.1
repository-code: https://github.com/ropensci/ReLTER
url: https://github.com/ropensci/ReLTER
contact:
- family-names: Oggioni
given-names: Alessandro
email: [email protected]
orcid: https://orcid.org/0000-0002-7997-219X
keywords:
- biodiversity-informatics
- data-science
- ecology
- elter
- r
- research-infrastructure
references:
- type: software
title: 'R: A Language and Environment for Statistical Computing'
notes: Depends
authors:
- name: R Core Team
location:
name: Vienna, Austria
year: '2023'
url: https://www.R-project.org/
institution:
name: R Foundation for Statistical Computing
version: '>= 3.5.0'
- type: software
title: countrycode
abstract: 'countrycode: Convert Country Names and Country Codes'
notes: Imports
authors:
- family-names: Arel-Bundock
given-names: Vincent
email: [email protected]
orcid: https://orcid.org/0000-0003-2042-7063
year: '2023'
url: https://vincentarelbundock.github.io/countrycode/
- type: software
title: dplyr
abstract: 'dplyr: A Grammar of Data Manipulation'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: François
given-names: Romain
orcid: https://orcid.org/0000-0002-2444-4226
- family-names: Henry
given-names: Lionel
- family-names: Müller
given-names: Kirill
orcid: https://orcid.org/0000-0002-1416-3412
year: '2023'
url: https://CRAN.R-project.org/package=dplyr
- type: software
title: dtplyr
abstract: 'dtplyr: Data Table Back-End for ''dplyr'''
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
- family-names: Girlich
given-names: Maximilian
- family-names: Fairbanks
given-names: Mark
- family-names: Dickerson
given-names: Ryan
year: '2023'
url: https://CRAN.R-project.org/package=dtplyr
- type: software
title: geodata
abstract: 'geodata: Download Geographic Data'
notes: Imports
authors:
- family-names: Hijmans
given-names: Robert J.
- family-names: Ghosh
given-names: Aniruddha
- family-names: Mandel
given-names: Alex
year: '2023'
- type: software
title: ggforce
abstract: 'ggforce: Accelerating ''ggplot2'''
notes: Imports
authors:
- family-names: Pedersen
given-names: Thomas Lin
email: [email protected]
orcid: https://orcid.org/0000-0002-5147-4711
year: '2023'
url: https://CRAN.R-project.org/package=ggforce
- type: software
title: ggplot2
abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: Chang
given-names: Winston
orcid: https://orcid.org/0000-0002-1576-2126
- family-names: Henry
given-names: Lionel
- family-names: Pedersen
given-names: Thomas Lin
email: [email protected]
orcid: https://orcid.org/0000-0002-5147-4711
- family-names: Takahashi
given-names: Kohske
- family-names: Wilke
given-names: Claus
orcid: https://orcid.org/0000-0002-7470-9261
- family-names: Woo
given-names: Kara
orcid: https://orcid.org/0000-0002-5125-4188
- family-names: Yutani
given-names: Hiroaki
orcid: https://orcid.org/0000-0002-3385-7233
- family-names: Dunnington
given-names: Dewey
orcid: https://orcid.org/0000-0002-9415-4582
year: '2023'
url: https://CRAN.R-project.org/package=ggplot2
- type: software
title: grDevices
abstract: 'R: A Language and Environment for Statistical Computing'
notes: Imports
authors:
- name: R Core Team
location:
name: Vienna, Austria
year: '2023'
url: https://www.R-project.org/
institution:
name: R Foundation for Statistical Computing
- type: software
title: grid
abstract: 'R: A Language and Environment for Statistical Computing'
notes: Imports
authors:
- name: R Core Team
location:
name: Vienna, Austria
year: '2023'
url: https://www.R-project.org/
institution:
name: R Foundation for Statistical Computing
- type: software
title: gridExtra
abstract: 'gridExtra: Miscellaneous Functions for "Grid" Graphics'
notes: Imports
authors:
- family-names: Auguie
given-names: Baptiste
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=gridExtra
- type: software
title: httr
abstract: 'httr: Tools for Working with URLs and HTTP'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=httr
- type: software
title: httr2
abstract: 'httr2: Perform HTTP Requests and Process the Responses'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=httr2
- type: software
title: jqr
abstract: 'jqr: Client for ''jq'', a ''JSON'' Processor'
notes: Imports
authors:
- family-names: FitzJohn
given-names: Rich
email: [email protected]
- family-names: Ooms
given-names: Jeroen
email: [email protected]
- family-names: Chamberlain
given-names: Scott
email: [email protected]
- name: Stefan Milton Bache
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=jqr
- type: software
title: jsonlite
abstract: 'jsonlite: A Simple and Robust JSON Parser and Generator for R'
notes: Imports
authors:
- family-names: Ooms
given-names: Jeroen
email: [email protected]
orcid: https://orcid.org/0000-0002-4035-0289
year: '2023'
url: https://CRAN.R-project.org/package=jsonlite
- type: software
title: leaflet
abstract: 'leaflet: Create Interactive Web Maps with the JavaScript ''Leaflet''
Library'
notes: Imports
authors:
- family-names: Cheng
given-names: Joe
email: [email protected]
- family-names: Karambelkar
given-names: Bhaskar
- family-names: Xie
given-names: Yihui
year: '2023'
url: https://CRAN.R-project.org/package=leaflet
version: '>= 2.1.1'
- type: software
title: lifecycle
abstract: 'lifecycle: Manage the Life Cycle of your Package Functions'
notes: Imports
authors:
- family-names: Henry
given-names: Lionel
email: [email protected]
- family-names: Wickham
given-names: Hadley
email: [email protected]
orcid: https://orcid.org/0000-0003-4757-117X
year: '2023'
url: https://CRAN.R-project.org/package=lifecycle
- type: software
title: lubridate
abstract: 'lubridate: Make Dealing with Dates a Little Easier'
notes: Imports
authors:
- family-names: Spinu
given-names: Vitalie
email: [email protected]
- family-names: Grolemund
given-names: Garrett
- family-names: Wickham
given-names: Hadley
year: '2023'
url: https://CRAN.R-project.org/package=lubridate
- type: software
title: magrittr
abstract: 'magrittr: A Forward-Pipe Operator for R'
notes: Imports
authors:
- family-names: Bache
given-names: Stefan Milton
email: [email protected]
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=magrittr
- type: software
title: MODIStsp
abstract: 'MODIStsp: Find, Download and Process MODIS Land Products Data'
notes: Imports
authors:
- family-names: Busetto
given-names: Lorenzo
orcid: https://orcid.org/0000-0001-9634-6038
- family-names: Ranghetti
given-names: Luigi
email: [email protected]
orcid: https://orcid.org/0000-0001-6207-5188
year: '2023'
url: https://CRAN.R-project.org/package=MODIStsp
- type: software
title: purrr
abstract: 'purrr: Functional Programming Tools'
notes: Imports
authors:
- family-names: Henry
given-names: Lionel
email: [email protected]
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=purrr
- type: software
title: qrcode
abstract: 'qrcode: Generate QRcodes with R'
notes: Imports
authors:
- family-names: Teh
given-names: Victor
email: [email protected]
- family-names: Onkelinx
given-names: Thierry
email: [email protected]
orcid: https://orcid.org/0000-0001-8804-4216
year: '2023'
url: https://CRAN.R-project.org/package=qrcode
- type: software
title: raster
abstract: 'raster: Geographic Data Analysis and Modeling'
notes: Imports
authors:
- family-names: Hijmans
given-names: Robert J.
email: [email protected]
orcid: https://orcid.org/0000-0001-5872-2872
year: '2023'
url: https://CRAN.R-project.org/package=raster
version: '>= 3.3-13'
- type: software
title: RColorBrewer
abstract: 'RColorBrewer: ColorBrewer Palettes'
notes: Imports
authors:
- family-names: Neuwirth
given-names: Erich
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=RColorBrewer
- type: software
title: RCurl
abstract: 'RCurl: General Network (HTTP/FTP/...) Client Interface for R'
notes: Imports
authors:
- family-names: Temple Lang
given-names: Duncan
email: [email protected]
orcid: https://orcid.org/0000-0003-0159-1546
year: '2023'
url: https://CRAN.R-project.org/package=RCurl
- type: software
title: Rdpack
abstract: 'Rdpack: Update and Manipulate Rd Documentation Objects'
notes: Imports
authors:
- family-names: Boshnakov
given-names: Georgi N.
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=Rdpack
- type: software
title: readr
abstract: 'readr: Read Rectangular Text Data'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
- family-names: Hester
given-names: Jim
- family-names: Bryan
given-names: Jennifer
email: [email protected]
orcid: https://orcid.org/0000-0002-6983-2759
year: '2023'
url: https://CRAN.R-project.org/package=readr
- type: software
title: rgeos
abstract: 'rgeos: Interface to Geometry Engine - Open Source (''GEOS'')'
notes: Imports
authors:
- family-names: Bivand
given-names: Roger
email: [email protected]
orcid: https://orcid.org/0000-0003-2392-6140
- family-names: Rundel
given-names: Colin
year: '2023'
url: https://CRAN.R-project.org/package=rgeos
- type: software
title: rnaturalearth
abstract: 'rnaturalearth: World Map Data from Natural Earth'
notes: Imports
authors:
- family-names: South
given-names: Andy
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=rnaturalearth
- type: software
title: rosm
abstract: 'rosm: Plot Raster Map Tiles from Open Street Map and Other Sources'
notes: Imports
authors:
- family-names: Dunnington
given-names: Dewey
email: [email protected]
orcid: https://orcid.org/0000-0002-9415-4582
year: '2023'
url: https://CRAN.R-project.org/package=rosm
- type: software
title: rworldmap
abstract: 'rworldmap: Mapping Global Data'
notes: Imports
authors:
- family-names: South
given-names: Andy
year: '2023'
url: https://CRAN.R-project.org/package=rworldmap
- type: software
title: sf
abstract: 'sf: Simple Features for R'
notes: Imports
authors:
- family-names: Pebesma
given-names: Edzer
email: [email protected]
orcid: https://orcid.org/0000-0001-8049-7069
year: '2023'
url: https://CRAN.R-project.org/package=sf
version: '>= 0.9-5'
- type: software
title: spocc
abstract: 'spocc: Interface to Species Occurrence Data Sources'
notes: Imports
authors:
- family-names: Owens
given-names: Hannah
email: [email protected]
orcid: https://orcid.org/0000-0003-0071-1745
- family-names: Barve
given-names: Vijay
orcid: https://orcid.org/0000-0002-4852-2567
- family-names: Chamberlain
given-names: Scott
orcid: https://orcid.org/0000-0003-1444-9135
year: '2023'
- type: software
title: stringi
abstract: 'stringi: Fast and Portable Character String Processing Facilities'
notes: Imports
authors:
- family-names: Gagolewski
given-names: Marek
- family-names: Tartanus
given-names: Bartek
- family-names: Unicode
given-names: others;
- name: Inc.
- name: others
year: '2023'
url: https://CRAN.R-project.org/package=stringi
- type: software
title: stringr
abstract: 'stringr: Simple, Consistent Wrappers for Common String Operations'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=stringr
- type: software
title: taxize
abstract: 'taxize: Taxonomic Information from Around the Web'
notes: Imports
authors:
- family-names: Chamberlain
given-names: Scott
email: [email protected]
orcid: https://orcid.org/0000-0003-1444-9135
- family-names: Szoecs
given-names: Eduard
- family-names: Foster
given-names: Zachary
email: [email protected]
- family-names: Arendsee
given-names: Zebulun
year: '2023'
url: https://CRAN.R-project.org/package=taxize
version: '>= 0.9.97'
- type: software
title: terra
abstract: 'terra: Spatial Data Analysis'
notes: Imports
authors:
- family-names: Hijmans
given-names: Robert J.
email: [email protected]
orcid: https://orcid.org/0000-0001-5872-2872
year: '2023'
url: https://CRAN.R-project.org/package=terra
- type: software
title: tibble
abstract: 'tibble: Simple Data Frames'
notes: Imports
authors:
- family-names: Müller
given-names: Kirill
email: [email protected]
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=tibble
- type: software
title: tidyr
abstract: 'tidyr: Tidy Messy Data'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
- family-names: Girlich
given-names: Maximilian
year: '2023'
url: https://CRAN.R-project.org/package=tidyr
- type: software
title: tmap
abstract: 'tmap: Thematic Maps'
notes: Imports
authors:
- family-names: Tennekes
given-names: Martijn
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=tmap
version: '>= 3.1'
- type: software
title: units
abstract: 'units: Measurement Units for R Vectors'
notes: Imports
authors:
- family-names: Pebesma
given-names: Edzer
email: [email protected]
orcid: https://orcid.org/0000-0001-8049-7069
- family-names: Mailund
given-names: Thomas
email: [email protected]
- family-names: Kalinowski
given-names: Tomasz
- family-names: Ucar
given-names: Iñaki
email: [email protected]
orcid: https://orcid.org/0000-0001-6403-5550
year: '2023'
url: https://CRAN.R-project.org/package=units
- type: software
title: utils
abstract: 'R: A Language and Environment for Statistical Computing'
notes: Imports
authors:
- name: R Core Team
location:
name: Vienna, Austria
year: '2023'
url: https://www.R-project.org/
institution:
name: R Foundation for Statistical Computing
- type: software
title: waffle
abstract: 'waffle: Create Waffle Chart Visualizations in R'
notes: Imports
authors:
- family-names: Rudis
given-names: Bob
email: [email protected]
- family-names: Gandy
given-names: Dave
year: '2023'
url: https://CRAN.R-project.org/package=waffle
- type: software
title: webshot
abstract: 'webshot: Take Screenshots of Web Pages'
notes: Imports
authors:
- family-names: Chang
given-names: Winston
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=webshot
- type: software
title: worrms
abstract: 'worrms: World Register of Marine Species (WoRMS) Client'
notes: Imports
authors:
- family-names: Chamberlain
given-names: Scott
email: [email protected]
orcid: https://orcid.org/0000-0003-1444-9135
year: '2023'
url: https://CRAN.R-project.org/package=worrms
- type: software
title: XML
abstract: 'XML: Tools for Parsing and Generating XML Within R and S-Plus'
notes: Imports
authors:
- family-names: Temple Lang
given-names: Duncan
email: [email protected]
orcid: https://orcid.org/0000-0003-0159-1546
year: '2023'
url: https://CRAN.R-project.org/package=XML
- type: software
title: xml2
abstract: 'xml2: Parse XML'
notes: Imports
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
- family-names: Hester
given-names: Jim
- family-names: Ooms
given-names: Jeroen
year: '2023'
url: https://CRAN.R-project.org/package=xml2
- type: software
title: xslt
abstract: 'xslt: Extensible Style-Sheet Language Transformations'
notes: Imports
authors:
- family-names: Ooms
given-names: Jeroen
email: [email protected]
orcid: https://orcid.org/0000-0002-4035-0289
year: '2023'
url: https://CRAN.R-project.org/package=xslt
- type: software
title: zen4R
abstract: 'zen4R: Interface to ''Zenodo'' REST API'
notes: Imports
authors:
- family-names: Blondel
given-names: Emmanuel
email: [email protected]
orcid: https://orcid.org/0000-0002-5870-5762
year: '2023'
url: https://CRAN.R-project.org/package=zen4R
- type: software
title: covr
abstract: 'covr: Test Coverage for Packages'
notes: Suggests
authors:
- family-names: Hester
given-names: Jim
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=covr
- type: software
title: httptest
abstract: 'httptest: A Test Environment for HTTP Requests'
notes: Suggests
authors:
- family-names: Richardson
given-names: Neal
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=httptest
- type: software
title: ISOcodes
abstract: 'ISOcodes: Selected ISO Codes'
notes: Suggests
authors:
- family-names: Buchta
given-names: Christian
- family-names: Hornik
given-names: Kurt
email: [email protected]
orcid: https://orcid.org/0000-0003-4198-9911
year: '2023'
url: https://CRAN.R-project.org/package=ISOcodes
- type: software
title: knitr
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
notes: Suggests
authors:
- family-names: Xie
given-names: Yihui
email: [email protected]
orcid: https://orcid.org/0000-0003-0645-5666
year: '2023'
url: https://CRAN.R-project.org/package=knitr
- type: software
title: rmarkdown
abstract: 'rmarkdown: Dynamic Documents for R'
notes: Suggests
authors:
- family-names: Allaire
given-names: JJ
email: [email protected]
- family-names: Xie
given-names: Yihui
email: [email protected]
orcid: https://orcid.org/0000-0003-0645-5666
- family-names: McPherson
given-names: Jonathan
email: [email protected]
- family-names: Luraschi
given-names: Javier
email: [email protected]
- family-names: Ushey
given-names: Kevin
email: [email protected]
- family-names: Atkins
given-names: Aron
email: [email protected]
- family-names: Wickham
given-names: Hadley
email: [email protected]
- family-names: Cheng
given-names: Joe
email: [email protected]
- family-names: Chang
given-names: Winston
email: [email protected]
- family-names: Iannone
given-names: Richard
email: [email protected]
orcid: https://orcid.org/0000-0003-3925-190X
year: '2023'
url: https://CRAN.R-project.org/package=rmarkdown
- type: software
title: rnaturalearthdata
abstract: 'rnaturalearthdata: World Vector Map Data from Natural Earth Used in ''rnaturalearth'''
notes: Suggests
authors:
- family-names: South
given-names: Andy
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=rnaturalearthdata
- type: software
title: testthat
abstract: 'testthat: Unit Testing for R'
notes: Suggests
authors:
- family-names: Wickham
given-names: Hadley
email: [email protected]
year: '2023'
url: https://CRAN.R-project.org/package=testthat
version: '>= 3.0.0'