src

May 6, 2024

63e234b · May 6, 2024

This branch is 1 commit behind hiruna72/squigualiser:main.

Name	Name	Last commit message	Last commit date
parent directory ..
server	server	update commands	May 3, 2023
__init__.py	__init__.py	update citation	Mar 19, 2024
_version.py	_version.py	updated version	May 6, 2024
bed_annotation.py	bed_annotation.py	bed annotation supports positive base shift	Jan 30, 2024
calculate_offsets.py	calculate_offsets.py	using readpaf locally	May 6, 2024
compare_alignment.py	compare_alignment.py	fix signal start index. print events	Jan 15, 2024
f5c_eventalign_draw.py	f5c_eventalign_draw.py	src files updated	Sep 8, 2022
f5c_resquiggle.py	f5c_resquiggle.py	src files updated	Sep 8, 2022
metric.py	metric.py	using readpaf locally	May 6, 2024
overlapped.py	overlapped.py	rename sqp to plot	Mar 27, 2023
plot.py	plot.py	update readme	May 6, 2024
plot_model.py	plot_model.py	src files updated	Sep 8, 2022
plot_pileup.py	plot_pileup.py	using readpaf locally	May 6, 2024
plot_tracks.py	plot_tracks.py	add a message about the recommended browser	Apr 26, 2024
plot_utils.py	plot_utils.py	plot_pileup has automatic baseshift calculation. docs updated	Apr 28, 2024
readpaf_local.py	readpaf_local.py	actually adding the local file now.lol	May 6, 2024
realign.py	realign.py	using readpaf locally	May 6, 2024
reform.py	reform.py	using readpaf locally	May 6, 2024
server.py	server.py	pile-up view on website	May 3, 2023
signal_chunk_plot.py	signal_chunk_plot.py	interactive signal editting introduced	Jan 13, 2023

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