2025.01 (#3454)

* 2025.01

* addressing comment @charles-cowart

Author: antgonza

CHANGELOG.md

@@ -1,5 +1,17 @@
 # Qiita changelog
 
+Version 2025.01
+---------------
+
+Deployed on January 15th, 2025
+
+* The Analysis owner is now displayed in the analysis list and the individual analysis page.
+* Admins can now use the per-preparation "Download Data Release" button to get a "BIOM" release; this version is focus on NPH data releases.
+* Improved complete_job creation time, which should result in Qiita jobs ([multiple steps](https://qiita.ucsd.edu/static/doc/html/dev/resource_allocation.html) finishing faster; for bencharks visit [patch 93.sql](https://github.com/qiita-spots/qiita/blob/master/qiita_db/support_files/patches/93.sql).
+* SPP improvements: TellSeq support added; plugin refactored to allow for easier additions like TellSeq in the future. Job restart greatly improved. Much improved handling of sample-names and ids that contain substrings like ‘I1’ and ‘R2’. New SequenceCount job can count sequences and base-pairs in parallel for any list of fastq files.
+* Other general fixes [#3440](https://github.com/qiita-spots/qiita/pull/3440), [#3445](https://github.com/qiita-spots/qiita/pull/3445), [#3446](https://github.com/qiita-spots/qiita/pull/3446),
+
+
 Version 2024.10
 ---------------
 
@@ -206,7 +218,7 @@ Version 2021.11
 * Allow chucked download of metadata files in analyses; this allows to process large meta-analysis (like those for The Microsetta Initiative) without worker blockage.
 * Added to the qp-qiime2 plugin the possibility of filtering tables based on system available "FeatureData[Sequence]"; to start we added 90/100/150 bps bloom tables.
 * Now we can instantiate a study via their title (Study.from_title); this will facilitate orchestration with qebil.
-* Speed up Study listing for admins and general users; the admin study display came down from 20 to 2 seconds.  
+* Speed up Study listing for admins and general users; the admin study display came down from 20 to 2 seconds.
 * Fixed the following issues: [3142](https://github.com/qiita-spots/qiita/issues/3142), [3149](https://github.com/qiita-spots/qiita/issues/3149), [3150](https://github.com/qiita-spots/qiita/issues/3150), [3119](https://github.com/qiita-spots/qiita/issues/3119), and [3160](https://github.com/qiita-spots/qiita/issues/3160).
 
 

qiita_core/__init__.py

@@ -6,4 +6,4 @@
 # The full license is in the file LICENSE, distributed with this software.
 # -----------------------------------------------------------------------------
 
-__version__ = "2024.10"
+__version__ = "2025.01"

qiita_db/__init__.py

@@ -27,7 +27,7 @@
 from . import user
 from . import processing_job
 
-__version__ = "2024.10"
+__version__ = "2025.01"
 
 __all__ = ["analysis", "artifact",  "archive", "base", "commands",
            "environment_manager", "exceptions", "investigation", "logger",

qiita_pet/__init__.py

@@ -6,4 +6,4 @@
 # The full license is in the file LICENSE, distributed with this software.
 # -----------------------------------------------------------------------------
 
-__version__ = "2024.10"
+__version__ = "2025.01"

qiita_pet/handlers/api_proxy/__init__.py

@@ -38,7 +38,7 @@
 from .user import (user_jobs_get_req)
 from .util import check_access, check_fp
 
-__version__ = "2024.10"
+__version__ = "2025.01"
 
 __all__ = ['prep_template_summary_get_req', 'data_types_get_req',
            'study_get_req', 'sample_template_filepaths_get_req',

qiita_ware/__init__.py

@@ -6,4 +6,4 @@
 # The full license is in the file LICENSE, distributed with this software.
 # -----------------------------------------------------------------------------
 
-__version__ = "2024.10"
+__version__ = "2025.01"

setup.py

@@ -10,7 +10,7 @@
 from setuptools import setup
 from glob import glob
 
-__version__ = "2024.10"
+__version__ = "2025.01"
 
 
 classes = """