Removing commented code

Author: josenavas

qiita_db/metadata_template/test/test_sample_template.py

@@ -1800,100 +1800,6 @@ def test_extend_update(self):
         for s_id in exp_sample_ids:
             self.assertEqual(st[s_id]._to_dict(), exp_dict[s_id])
 
-    # def test_extend_and_update(self):
-    #     st = qdb.metadata_template.sample_template.SampleTemplate.create(
-    #         self.metadata, self.new_study)
-    #     self.metadata_dict['Sample4'] = {
-    #         'physical_specimen_location': 'location1',
-    #         'physical_specimen_remaining': 'true',
-    #         'dna_extracted': 'true',
-    #         'sample_type': 'type1',
-    #         'collection_timestamp': '2014-05-29 12:24:15',
-    #         'host_subject_id': 'NotIdentified',
-    #         'Description': 'Test Sample 4',
-    #         'latitude': '42.42',
-    #         'longitude': '41.41',
-    #         'taxon_id': '9606',
-    #         'scientific_name': 'homo sapiens'}
-    #
-    #     # Change a couple of values on the existent samples to test that
-    #     # they actually change
-    #     self.metadata_dict['Sample1']['Description'] = 'Changed'
-    #     self.metadata_dict['Sample2']['dna_extracted'] = 'Changed dynamic'
-    #
-    #     md_ext = pd.DataFrame.from_dict(self.metadata_dict, orient='index',
-    #                                     dtpye=str)
-    #     md_ext['TOT_NITRO'] = pd.Series(['val1', 'val2', 'val3', 'val4'],
-    #                                     index=md_ext.index)
-    #
-    #     npt.assert_warns(qdb.exceptions.QiitaDBWarning, st.extend, md_ext)
-    #
-    #     exp_sample_ids = {"%s.Sample1" % st.id, "%s.Sample2" % st.id,
-    #                       "%s.Sample3" % st.id, "%s.Sample4" % st.id}
-    #     self.assertEqual(st._get_sample_ids(), exp_sample_ids)
-    #     self.assertEqual(len(st), 4)
-    #     exp_categories = {'collection_timestamp', 'description',
-    #                       'dna_extracted', 'host_subject_id', 'latitude',
-    #                       'longitude', 'physical_specimen_location',
-    #                       'physical_specimen_remaining', 'sample_type',
-    #                       'scientific_name', 'taxon_id', 'tot_nitro'}
-    #     self.assertItemsEqual(st.categories(), exp_categories)
-    #     exp_dict = {
-    #         "%s.Sample1" % st.id: {
-    #             'collection_timestamp': '2014-05-29 12:24:15',
-    #             'description': "Changed",
-    #             'dna_extracted': 'true',
-    #             'host_subject_id': "NotIdentified",
-    #             'latitude': '42.42',
-    #             'longitude': '41.41',
-    #             'physical_specimen_location': "location1",
-    #             'physical_specimen_remaining': 'true',
-    #             'sample_type': "type1",
-    #             'taxon_id': '9606',
-    #             'scientific_name': 'homo sapiens',
-    #             'tot_nitro': 'val1'},
-    #         "%s.Sample2" % st.id: {
-    #             'collection_timestamp': '2014-05-29 12:24:15',
-    #             'description': "Test Sample 2",
-    #             'dna_extracted': 'Changed dynamic',
-    #             'host_subject_id': "NotIdentified",
-    #             'latitude': '4.2',
-    #             'longitude': '1.1',
-    #             'physical_specimen_location': "location1",
-    #             'physical_specimen_remaining': 'true',
-    #             'sample_type': "type1",
-    #             'taxon_id': '9606',
-    #             'scientific_name': 'homo sapiens',
-    #             'tot_nitro': 'val2'},
-    #         "%s.Sample3" % st.id: {
-    #             'collection_timestamp': '2014-05-29 12:24:15',
-    #             'description': "Test Sample 3",
-    #             'dna_extracted': 'true',
-    #             'host_subject_id': "NotIdentified",
-    #             'latitude': '4.8',
-    #             'longitude': '4.41',
-    #             'physical_specimen_location': "location1",
-    #             'physical_specimen_remaining': 'true',
-    #             'sample_type': "type1",
-    #             'taxon_id': '9606',
-    #             'scientific_name': 'homo sapiens',
-    #             'tot_nitro': 'val3'},
-    #         '%s.Sample4' % st.id: {
-    #             'physical_specimen_location': 'location1',
-    #             'physical_specimen_remaining': 'true',
-    #             'dna_extracted': 'true',
-    #             'sample_type': 'type1',
-    #             'collection_timestamp': '2014-05-29 12:24:15',
-    #             'host_subject_id': 'NotIdentified',
-    #             'description': 'Test Sample 4',
-    #             'latitude': '42.42',
-    #             'longitude': '41.41',
-    #             'taxon_id': '9606',
-    #             'scientific_name': 'homo sapiens',
-    #             'tot_nitro': 'val4'}}
-    #     for s_id in exp_sample_ids:
-    #         self.assertEqual(st[s_id]._to_dict(), exp_dict[s_id])
-
     def test_to_dataframe(self):
         st = qdb.metadata_template.sample_template.SampleTemplate.create(
             self.metadata, self.new_study)