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committedFeb 23, 2025·
update CHANGELOG.md
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Diff for: ‎CHANGELOG.md

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@@ -9,7 +9,11 @@ Deployed on February 24th, 2025
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* Via qp-spades, replaced the legacy `spades` command for `cloudSPAdes` for TellSeq.
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* `FASTA_preprocessed` within qtp-sequencing now allows for results to be named using their sample-name, extra from run-prefix.
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* `Remove SynDNA inserts & plasmid reads` superseded `Remove SynDNA reads`, which now removes SynDna inserts and plasmids.
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* [ToDo] SPP changes.
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* `update_resource_allocation_redis` now relies on using equations stored in the database vs. hardcoded; thank you @Gossty!
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* SPP: Updated prep-info file generation to identify and report filtered fastq files that could not be matched to a sample-id instead of silently ignoring them.
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* SPP: Removed legacy test code and example files for amplicon processing. Some other tests updated and repurposed.
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* SPP: jobs are now easier to restart.
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* SPP: MultiQC report generation is now a separate slurm job & use jinja2 templates; also FastQC use jinja2 templates.
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Version 2025.01

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