fixing errors

Author: antgonza

qiita_pet/support_files/doc/source/tutorials/prepare-information-files.rst

@@ -177,13 +177,13 @@ Without this columns you will not be able to submit to EBI. These are the column
 
 Valid values for instrument_model per platform, taken from ftp://ftp.sra.ebi.ac.uk/meta/xsd/sra_1_5/SRA.common.xsd
 
-+--------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
-| Platform     | Valid instrument_model options                                                                                                                                                                                                                                                                   |
-+==============+==================================================================================================================================================================================================================================================================================================+
-| ``LS454``    | ``454 GS``, ``454 GS 20``, ``454 GS FLX``, ``454 GS FLX+``, ``454 GS FLX Titanium``, ``454 GS Junior``, or ``unspecified``                                                                                                                                                                       |
-+--------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
++--------------+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
+| Platform     | Valid instrument_model options                                                                                                                                                                                                                                                                    |
++==============+===================================================================================================================================================================================================================================================================================================+
+| ``LS454``    | ``454 GS``, ``454 GS 20``, ``454 GS FLX``, ``454 GS FLX+``, ``454 GS FLX Titanium``, ``454 GS Junior``, or ``unspecified``                                                                                                                                                                        |
++--------------+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
 | ``Illumina`` | ``Illumina Genome Analyzer``, ``Illumina Genome Analyzer II``, ``Illumina Genome Analyzer IIx``, ``Illumina HiSeq 2500``, ``Illumina HiSeq 2000``, ``Illumina HiSeq 1500``, ``Illumina HiSeq 1000``, ``Illumina MiSeq``, ``Illumina HiScanSQ``, ``HiSeq X Ten``, ``NextSeq 500``, ``unspecified`` |
-+--------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
++--------------+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
 
 .. _required-fields-for-preprocessing-target-gene-data:
 

qiita_pet/test/test_download.py

@@ -140,7 +140,7 @@ def test_download_study(self):
             '[0-9]*.txt mapping_files/6_mapping_file.txt\n'
             '- 36615 /protected/templates/1_prep_2_qiime_[0-9]*-'
             '[0-9]*.txt mapping_files/7_mapping_file.txt\n'
-            '- 39752 /protected/BIOM/{0}/otu_table.biom '
+            '- [0-9]* /protected/BIOM/{0}/otu_table.biom '
             'BIOM/{0}/otu_table.biom\n'
             '- 1 /protected/BIOM/{0}/sortmerna_picked_otus/seqs_otus.log '
             'BIOM/{0}/sortmerna_picked_otus/seqs_otus.log\n'
@@ -161,7 +161,7 @@ def test_download_study(self):
         response = self.get('/download_study_bioms/1')
         self.assertEqual(response.code, 200)
         exp = (
-            '- 39752 /protected/BIOM/{0}/otu_table.biom '
+            '- [0-9]* /protected/BIOM/{0}/otu_table.biom '
             'BIOM/{0}/otu_table.biom\n'
             '- 1 /protected/BIOM/{0}/sortmerna_picked_otus/seqs_otus.log '
             'BIOM/{0}/sortmerna_picked_otus/seqs_otus.log\n'