Hi @qczhang , this is Bo Li from UC Berkeley. We are working on some experiments using your icSHAPE data published in Nature. Can you let me know the Bowtie 2 options you have used so that we can repeat your experiments? In particular, we are interested in the options for generating "up to ten random hits".
Thanks a lot!
Bo
Hi @qczhang , this is Bo Li from UC Berkeley. We are working on some experiments using your icSHAPE data published in Nature. Can you let me know the Bowtie 2 options you have used so that we can repeat your experiments? In particular, we are interested in the options for generating "up to ten random hits".
Thanks a lot!
Bo