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1212| RNAseq DE analysis | [ qbic-pipelines/rnadeseq] ( https://github.com/qbic-pipelines/rnadeseq ) | 1.3.2 |
1313| WGS / WES | [ nf-core/sarek] ( https://nf-co.re/sarek/2.7.1 ) | 2.7.1 |
1414| HLAtyping | [ nf-core/hlatyping] ( https://nf-co.re/hlatyping/1.2.0 ) | 1.2.0 |
15- | 16S amplicon | [ nf-core/ampliseq] ( https://nf-co.re/ampliseq/2.1.0 ) | 2.1.0 |
15+ | 16S amplicon | [ nf-core/ampliseq] ( https://nf-co.re/ampliseq/2.1.1 ) | 2.1.1 |
1616| Shotgun metagenomics | [ nf-core/mag] ( https://nf-co.re/mag/2.1.0 ) | 2.1.0 |
1717| BCR / TCR repseq | [ nf-core/bcellmagic] ( https://nf-co.re/bcellmagic/2.0.0 ) | 2.0.0 |
1818| CAGEseq | [ nf-core/cageseq] ( https://nf-co.re/cageseq/1.0.2 ) | 1.0.2 |
1919| MHC immunopeptidomics | [ nf-core/mhcquant] ( https://nf-co.re/mhcquant/2.0.0 ) | 2.0.0 |
2020| ATACseq | [ nf-core/atacseq] ( https://nf-co.re/atacseq/1.2.1 ) | 1.2.1 |
21- | Chipseq | [ nf-core/chipseq] ( https://nf-co.re/chipseq/1.2.1 ) | 1.2.1 |
21+ | Chipseq | [ nf-core/chipseq] ( https://nf-co.re/chipseq/1.2.2 ) | 1.2.2 |
2222| Epitope prediction | [ nf-core/epitopeprediction] ( https://nf-co.re/epitopeprediction/1.1.0 ) | 1.1.0 |
2323| Bacterial assembly | [ nf-core/bacass] ( https://nf-co.re/bacass/2.0.0 ) | 2.0.0 |
2424| RNA fusion | [ nf-core/rnafusion] ( https://nf-co.re/rnafusion/1.2.0 ) | 1.2.0 |
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