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This repository was archived by the owner on Dec 17, 2018. It is now read-only.

Commit 04918a5

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pajannepajanne
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add live coding session from Wed 4 July 2018 course and small example of pandas
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‎README.md

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@@ -44,6 +44,9 @@ pip install matplotlib
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# biopython
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pip install biopython
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# pandas
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pip install pandas
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```
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On mac OSX you may need to run this command to accept the XCode license, before installing biopython:

‎live/data/genes.txt

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gene chrom start end
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BRCA2 13 32889611 32973805
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TNFAIP3 6 138188351 138204449
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TCF7 5 133450402 133487556

‎live/data/seq.txt

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AAAAAAAAAAAA
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TTTTTTTTTTTT
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CCCCCC
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GGGG
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ATCGAATCGTAAA

‎live/gc_content_data.csv

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seq,gc
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AAAAAAAAAAAA,0
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TTTTTTTTTTTT,0
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CCCCCC,6
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GGGG,4
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ATCGAATCGTAAA,4

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