Repositories list

• BrainLM

  Public

  vandijklab/BrainLM’s past year of commit activity
  Jupyter Notebook

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  Other

  •44 forks•1414 stars•1616 issues•00 pull requests•Updated Nov 22, 2025Nov 22, 2025

• cell2sentence

  Public
  Cell2Sentence: Teaching Large Language Models the Language of Biology

  Jupyter Notebook

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  Apache License 2.0

  •126126 forks•854854 stars•1010 issues•33 pull requests•Updated Nov 4, 2025Nov 4, 2025

• CINEMA-OT

  Public

  vandijklab/CINEMA-OT’s past year of commit activity
  Jupyter Notebook

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  GNU Affero General Public License v3.0

  •77 forks•3838 stars•22 issues•00 pull requests•Updated Apr 16, 2025Apr 16, 2025

• Intelligence_at_the_edge_of_chaos

  Public
  Jupyter Notebook

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  GNU General Public License v3.0

  •88 forks•7272 stars•00 issues•00 pull requests•Updated Mar 1, 2025Mar 1, 2025

• CST

  Public
  Continuous Spatiotemporal Transformer

  Python

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  MIT License

  •55 forks•2323 stars•00 issues•00 pull requests•Updated May 30, 2023May 30, 2023

• CPSC482

  Public

  vandijklab/CPSC482’s past year of commit activity
  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 12, 2023Apr 12, 2023

• HBEC_SARS-CoV-2_scRNA-seq

  Public

  vandijklab/HBEC_SARS-CoV-2_scRNA-seq’s past year of commit activity
  Supplementary data for "Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells"

  Jupyter Notebook

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  MIT License

  •22 forks•55 stars•22 issues•00 pull requests•Updated Feb 4, 2021Feb 4, 2021

• self-supervsed_edge_feats

  Public
  code for "Self-supervised edge features for improved Graph Neural Network training", <arxivlink>

  Jupyter Notebook

  •66 forks•00 stars•00 issues•00 pull requests•Updated Jan 4, 2021Jan 4, 2021

• encoding_wasserstein_metrics

  Public
  Using set encoders to encode Wasserstein Spaces

  Jupyter Notebook

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  MIT License

  •22 forks•00 stars•00 issues•00 pull requests•Updated Nov 2, 2020Nov 2, 2020

• single-cell_neurodegeneration

  Public

  vandijklab/single-cell_neurodegeneration’s past year of commit activity
  Code for Tejwani L* & Ravindra NG* et al. 2020

  Jupyter Notebook

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 24, 2020Aug 24, 2020

• scGAT

  Public
  Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attention Networks" to appear…

  Python

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  MIT License

  •44 forks•1818 stars•22 issues•00 pull requests•Updated May 27, 2020May 27, 2020