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@borealbirds Boreal Avian Modelling Project

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    33 repositories

    • LandbirdModelsV5

      Public
      BAM Landbird Models
      birdsmodelsdensityabundanceboreallandbirds
      R
      •0•2•0•0•Updated Dec 28, 2024Dec 28, 2024

    • WildTrax-dataHarmonization

      Public
      This repo aims to keep everything that is needed to translate source data to expected WildTrax upload format
      R
      •1•1•6•0•Updated Dec 16, 2024Dec 16, 2024

    • BAMexploreR

      Public
      R
      •0•0•2•0•Updated Dec 13, 2024Dec 13, 2024

    • BAMexploreR_estimation

      Public
      Placeholder for scripts creating objects needed for testing BAMexploreR fct
      R
      •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

    • borealbirds.github.io

      Public
      Public facing website
      HTML
      •1•2•0•0•Updated Apr 18, 2024Apr 18, 2024

    • QPAD

      Public
      Calibrating indices of avian density from non-standardized survey data
      R
      •2•2•1•0•Updated Feb 1, 2024Feb 1, 2024

    • Zonation_EHJV_Prioritization

      Public
      This repo has a step by step guide on how to run a prioritization in Zonation 5 along with the relevant information on the EHJV prioritization
      R
      •0•0•0•0•Updated Oct 7, 2023Oct 7, 2023

    • qpad-offsets

      Public
      A user-friendly way to calculate QPAD offsets
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 26, 2023Sep 26, 2023

    • QPADestimation

      Public
      Removal and distance sampling to populate the QPAD package
      R
      •0•0•0•0•Updated Sep 12, 2023Sep 12, 2023

    • cross-border-birds-forestry

      Public
      A mini website describing the cross border birds and forestry project
      birdsconservationcommunity-engagementco-productionsustainable-forestry
      0•0•0•0•Updated Sep 23, 2022Sep 23, 2022

    • bamanalytics

      Public
      Boreal Avian Modeling Project
      R
      •4•0•0•0•Updated Jul 24, 2022Jul 24, 2022

    • BAMTools

      Public
      HTML
      •1•1•0•0•Updated Jun 28, 2022Jun 28, 2022

    • PHB

      Public
      Post-hoc binning provides a method of rapidly producing and assessing categorical models of bird density for a given study area using existing rasters of predicted bird density.
      1•0•0•0•Updated Mar 11, 2022Mar 11, 2022

    • api

      Public
      Species Results API
      0•0•0•0•Updated Feb 23, 2022Feb 23, 2022

    • GNM

      Public
      Generalized National Models
      modelcanadadensity-estimationspeciespredictors
      HTML
      •2•1•0•0•Updated Dec 17, 2021Dec 17, 2021

    • CHID_WOTH_CAWA

      Public
      Critical Habitat ID work for Wood Thrush and Canada Warbler
      HTML
      •0•0•0•0•Updated Nov 1, 2021Nov 1, 2021

    • mini-website-template

      Public
      A starting point for templating mini websites using R and Jekyll
      jekyllrrstats
      R
      •
      Other
      •0•1•0•0•Updated Jul 20, 2021Jul 20, 2021

    • qpad-workshop

      Public
      Point Count Data Analysis
      R
      •
      MIT License
      •10•1•0•0•Updated Apr 9, 2021Apr 9, 2021

    • ring-of-fire

      Public
      Fing of Fire project website
      R
      •
      MIT License
      •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

    • ABMI-BAM-bird-models-ALCES-Online

      Public
      Stores the model coefficients and the bird species indicators based on those coefficients, run in ALCES Online land use scenarios
      R
      •0•0•0•0•Updated Jul 6, 2020Jul 6, 2020

    • Patchworks-NRV-cure4insect

      Public
      Uses the cure4insect package to predict bird species abundance in two Patchworks harvest scenarios and in a NRV scenario simulating an absence of human footprint
      R
      •0•0•0•0•Updated Jun 6, 2020Jun 6, 2020

    • cawa-bcr-14

      Public
      Canada Warbler Zonation results for BCR 14
      Batchfile
      •0•0•0•0•Updated Feb 11, 2020Feb 11, 2020

    • paired

      Public
      Example point count data set with paired human and ARU data
      Creative Commons Attribution Share Alike 4.0 International
      •1•0•0•0•Updated Aug 27, 2018Aug 27, 2018

    • NBarker-BCVRImodels

      Public
      R
      •1•0•0•0•Updated Aug 13, 2018Aug 13, 2018

    • tutorials

      Public
      Tutorials describing BAM's analytical workflow (!= SOP)
      2•1•5•0•Updated Jul 9, 2018Jul 9, 2018

    • bamguide

      Public
      The BAM guide to the analysis of messy bird data
      HTML
      •1•0•0•0•Updated May 22, 2018May 22, 2018

    • 2018Workplan

      Public
      R
      •0•0•0•0•Updated Apr 25, 2018Apr 25, 2018

    • MCFNbirdmodels

      Public
      Bird density models for Moose Cree FN
      R
      •1•0•0•0•Updated Apr 11, 2018Apr 11, 2018

    • CommonScripts

      Public
      Scripts that are used across projects (e.g., data pre-processing, lookup tables, etc)
      R
      •0•0•0•0•Updated Mar 1, 2018Mar 1, 2018

    • lhreg

      Public
      Phylogeny and species trait effects on detectability
      birdsecologyborealphylogenydetectabilityspecies-trait-effects
      HTML
      •1•1•0•0•Updated Feb 9, 2018Feb 9, 2018