remove metric

Author: littlecabiria

src/metrics/ks_statistic_sc_features/config.vsh.yaml

@@ -18,16 +18,6 @@ info:
       maximize: false
       references:
         doi: 10.1201/9780429485572
-    - name: ks_statistic_celltype_interaction
-      label: Celltype interaction
-      summary: KS statistic of the celltype interaction
-      description: |
-        The Kolmogorov-Smirnov statistic comparing the Celltype interaction in the real datasets versus the Celltype interaction in the simulated datasets.
-      min: -Inf
-      max: +Inf
-      maximize: false
-      references:
-        doi: 10.1201/9780429485572
     - name: ks_statistic_nn_correlation
       label: Library size
       summary: KS statistic of the library size.

src/metrics/ks_statistic_sc_features/script.R

@@ -131,10 +131,7 @@ ks_statistic_L_stats <- try_kde_test(
   x1 = as.numeric(real_scfeatures_result$L_stats),
   x2 = as.numeric(sim_scfeatures_result$L_stats)
 )
-ks_statistic_celltype_interaction <- try_kde_test(
-  x1 = as.numeric(real_scfeatures_result$celltype_interaction),
-  x2 = as.numeric(sim_scfeatures_result$celltype_interaction)
-)
+
 ks_statistic_nn_correlation <- try_kde_test(
   x1 = as.numeric(real_scfeatures_result$nn_correlation),
   x2 = as.numeric(sim_scfeatures_result$nn_correlation)
@@ -147,14 +144,14 @@ ks_statistic_morans_I <- try_kde_test(
 cat("Combining metric values\n")
 uns_metric_ids <- c(
   "ks_statistic_L_stats",
-  "ks_statistic_celltype_interaction",
+  
   "ks_statistic_nn_correlation",
   "ks_statistic_morans_I"
 )
 
 uns_metric_values <- c(
   ks_statistic_L_stats$zstat,
-  ks_statistic_celltype_interaction$zstat,
+  
   ks_statistic_nn_correlation$zstat,
   ks_statistic_morans_I$zstat
 )