Merge pull request #2454 from opencobra/develop

Develop

Author: farid-zare

.github/workflows/UpdateContributors.yml

@@ -3,15 +3,14 @@ name: Update Contributors list
 on:
   push:
     branches:
-      - develop
+      - master
 
 jobs:
   build:
     runs-on: ubuntu-latest
 
     steps:
       - uses: actions/checkout@v3
-
       - name: Set up Python 3.10
         uses: actions/setup-python@v3
         with:
@@ -32,12 +31,12 @@ jobs:
         run: |
           python GenerateContributorsHTML.py
 
-      - name: Deploy to docs
+      - name: Deploy to gh-pages/stable
         uses: peaceiris/actions-gh-pages@v3
         with:
           github_token: ${{ secrets.GITHUB_TOKEN }}
           publish_dir: ./documentation/source/Contributions/contributors
-          publish_branch: develop
+          publish_branch: gh-pages
           keep_files: true
-          destination_dir: docs
+          destination_dir: stable
           commit_message: "Update Contributors (Automatic Workflow)"

.github/workflows/UpdateFunctionDocs.yml

@@ -3,15 +3,14 @@ name: Update function docs
 on:
   push:
     branches:
-      - develop
+      - master
 
 jobs:
   build:
     runs-on: ubuntu-latest
 
     steps:
       - uses: actions/checkout@v3
-
       - name: Set up Python 3.10
         uses: actions/setup-python@v3
         with:
@@ -50,26 +49,26 @@ jobs:
         uses: JamesIves/github-pages-deploy-action@v4
         with:
           folder: ./documentation/build/html/modules
-          branch: develop
-          target-folder: docs/modules
+          branch: gh-pages
+          target-folder: stable/modules
           commit-message: "update Function Docs (Automatic Workflow)"
 
       - name: Deploy the citations page
         uses: peaceiris/actions-gh-pages@v3
         with:
           github_token: ${{ secrets.GITHUB_TOKEN }}
           publish_dir: ./documentation/source/Citations
-          publish_branch: develop
+          publish_branch: gh-pages
           keep_files: true
-          destination_dir: docs
+          destination_dir: stable
           commit_message: "update Function Docs (Automatic Workflow)"
 
       - name: Deploy the citations static page
         uses: peaceiris/actions-gh-pages@v3
         with:
           github_token: ${{ secrets.GITHUB_TOKEN }}
           publish_dir: ./documentation/build/html/_static
-          publish_branch: develop
+          publish_branch: gh-pages
           keep_files: true
-          destination_dir: docs/_static
+          destination_dir: stable/_static
           commit_message: "update Function Docs (Automatic Workflow)"

.github/workflows/UpdateTutorialIndex.yml

@@ -2,7 +2,7 @@ name: Extract HTML Info
 
 on:
   push:
-    branches: [develop]
+    branches: gh-pages
     paths:
     - '**.html'
 
@@ -15,6 +15,7 @@ jobs:
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
           fetch-depth: 0
+          ref: gh-pages
 
       - name: Check Commit Message
         id: check_msg
@@ -45,7 +46,7 @@ jobs:
           changed_files=$(git diff --name-only HEAD~1 HEAD | grep '\.html' | tr '\n' ' ')
           for file in $changed_files; do
               echo "Processing: $file"
-              python ./docs/extract_info.py $file
+              python ./stable/extract_info.py $file
           done
           
       - name: Commit and Push New File
@@ -55,4 +56,4 @@ jobs:
           git config user.email "github-actions[bot]@users.noreply.github.com"
           git add .
           git commit -m "Update Tutorial (Automatic Workflow)" || echo "No changes to commit"
-          git push origin master
+          git push

.github/workflows/testAllCI_step2.yml

@@ -36,7 +36,7 @@ jobs:
           echo "PR_NUMBER=$PR_NUMBER" >> $GITHUB_ENV
 
       - name: Publish Test Report
-        uses: ctrf-io/[email protected].6
+        uses: ctrf-io/[email protected].7
         with:
           report-path: 'artifacts/ctrf-report.json'          
           community-report: true