added target versions to package gen specs and skip mriqc and qsmxt tests

Author: tclose

example-specs/pkg-gen/mriqc.yaml

@@ -1,4 +1,5 @@
 mriqc:
+  target_version: "v24"
   interfaces:
     - mriqc.interfaces.diffusion.DiffusionQC
     - mriqc.interfaces.diffusion.ReadDWIMetadata

example-specs/pkg-gen/nipype_ports.yaml

@@ -1,4 +1,5 @@
 nipype_ports:
+  target_version: "v1_10"
   interfaces:
     - nipype.algorithms.confounds.TSNR
     - nipype.algorithms.confounds.ComputeDVARS

example-specs/pkg-gen/nireports.yaml

@@ -1,4 +1,5 @@
 nireports:
+  target_version: "v25"
   interfaces:
     - nireports.interfaces.fmri.FMRISummary
     - nireports.interfaces.dmri.DWIHeatmap

example-specs/pkg-gen/niworkflows.yaml

@@ -1,4 +1,5 @@
 niworkflows:
+  target_version: "v1_13"
   interfaces:
     - niworkflows.data.Loader
     - niworkflows.interfaces.bids.DerivativesDataSink

example-specs/pkg-gen/qsmxt.yaml

@@ -1,4 +1,5 @@
 qsmxt:
+  target_version: "v8"
   interfaces:
   - qsmxt.interfaces.nipype_interface_addtojson.AddToJsonInterface
   - qsmxt.interfaces.nipype_interface_analyse.AnalyseInterface

nipype2pydra/pkg_gen/tests/test_pkg_gen.py

@@ -4,11 +4,14 @@
 
 from conftest import EXAMPLE_PKG_GEN_DIR
 
+SKIP_PACKAGES = ["mriqc", "qsmxt"]
+
 
 @pytest.fixture(
     params=[
         str(p.relative_to(EXAMPLE_PKG_GEN_DIR)).replace("/", "-")[:-5]
         for p in (EXAMPLE_PKG_GEN_DIR).glob("**/*.yaml")
+        if p.stem not in SKIP_PACKAGES
     ]
 )
 def pkg_gen_spec_file(request):

pyproject.toml

@@ -51,11 +51,12 @@ test = [
     "fileformats-medimage-extras",
     "fileformats-medimage-afni",
     "niworkflows",
-#    "mriqc",
+    # "mriqc",
     "nipy",
     "nireports",
     "nitime",
     "datalad",
+    # "qsmxt",
     "nirodents",
 ]
 docs = [