Skip to content

Issues: nf-core/raredisease

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clear current search query, filters, and sorts
31 Open 79 Closed
31 Open 79 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

DeepMind AlphaMissense Effort low enhancement Improvement for existing functionality on hold Not planned yet or needs refinement
#427 opened Sep 20, 2023 by dnil
1 👀 1
Test+Docker profile fails: "The TensorFlow library was compiled to use AVX instructions, but these aren't available on your machine." bug Something isn't working
#590 opened Aug 12, 2024 by sitems
5 👀 1
gnomAD v4.1 SV database contains mix of SV and CNV - svdb problem bug Something isn't working
#615 opened Sep 20, 2024 by fa2k
1 👀 1
Add more entry points to the workflow Effort high enhancement Improvement for existing functionality Impact high Priority medium
#261 opened Nov 29, 2022 by ramprasadn Release 1.3.0
7
Add full sized test dataset enhancement Improvement for existing functionality
#316 opened Mar 25, 2023 by ramprasadn Release 1.3.0
Customize aws full pipeline tests enhancement Improvement for existing functionality
#318 opened Mar 25, 2023 by ramprasadn Release 1.3.0
Add BPHunter feature-request Request for a new pipeline feature on hold Not planned yet or needs refinement
#424 opened Sep 11, 2023 by ramprasadn
GENMOD and missing values on master bug Something isn't working
#426 opened Sep 17, 2023 by lfearnley
SMNCOPYNUMBERCALLER ZeroDivisionError: float division by zero bug Something isn't working
#447 opened Nov 21, 2023 by yunhua1031
4
use estimated sex in analysis enhancement Improvement for existing functionality
#465 opened Jan 8, 2024 by jemten
manta path error bug Something isn't working
#480 opened Jan 16, 2024 by egenomics
14
Update CADD to version 1.7
#513 opened Feb 6, 2024 by jemten Release 1.3.0
2
rtgtools: Add truth set filtered by bait set for WES samples bug Something isn't working enhancement Improvement for existing functionality
#514 opened Feb 8, 2024 by peterpru
PIPELINE: write tests for local modules + subworkflows enhancement Improvement for existing functionality
#84 opened Jan 19, 2022 by projectoriented
1
https://ai.marrvel.org / how to integrate to Scout and our analysis?
#560 opened May 27, 2024 by fulyataylan
5
Bigtools enhancement Improvement for existing functionality
#564 opened Jun 8, 2024 by ramprasadn
Mismatch with new DNAScope ML model format bug Something isn't working
#568 opened Jun 13, 2024 by Jakob37
3
Test+Docker profile fails: "ValueError: call_variants_outputs did not pass sanity check." bug Something isn't working
#592 opened Aug 12, 2024 by sitems
1
filter_vep broken with hg38 bug Something isn't working
#599 opened Aug 15, 2024 by fellen31
1
Option to publish GVCFs enhancement Improvement for existing functionality
#602 opened Aug 20, 2024 by sitems
2
Allow multiple unrelated cases/families in samplesheet.csv enhancement Improvement for existing functionality
#604 opened Aug 22, 2024 by sitems
1
Help with figuring out if error is pipeline or HPC related bug Something isn't working
#612 opened Sep 18, 2024 by hrydbeck
1
Split deepvariant pipeline enhancement Improvement for existing functionality
#614 opened Sep 20, 2024 by fa2k
1
Fixed file configurations for VEP plugins bug Something isn't working
#685 opened Mar 4, 2025 by kubranarci
Error_during_installation bug Something isn't working
#537 opened Apr 1, 2024 by vishramt7
10
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.