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A few times now users have been confused that annotation files did not execute, when they did not turn on any screening workflow.
It seems sometimes people want a pipeline just to run prodigal/prokka etc.
We could change the current scheme so it always runs (or ad a validation check that if any of the downstream screening turned on, and annotation is off, it will not run). This maybe would allow us to remove this montrousity
Description of feature
A few times now users have been confused that annotation files did not execute, when they did not turn on any screening workflow.
It seems sometimes people want a pipeline just to run prodigal/prokka etc.
We could change the current scheme so it always runs (or ad a validation check that if any of the downstream screening turned on, and annotation is off, it will not run). This maybe would allow us to remove this montrousity
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