diff --git a/conf/seattlechildrens.config b/conf/seattlechildrens.config index e45de4014..2492158f6 100644 --- a/conf/seattlechildrens.config +++ b/conf/seattlechildrens.config @@ -9,7 +9,7 @@ process { executor = 'slurm' queue = 'cpu-core' memory = 7500.MB - time = '72h' + time = 72.h clusterOptions = "--account ${System.getenv("ASSOC")}" withLabel:'process_gpu' { diff --git a/docs/seattlechildrens.md b/docs/seattlechildrens.md index 8ea085a48..103246b1c 100644 --- a/docs/seattlechildrens.md +++ b/docs/seattlechildrens.md @@ -29,8 +29,7 @@ channels: - conda-forge dependencies: - python>=3.9 - - nextflow==25.04.8 - - nf-core==3.4.1 + - nextflow==26.04.3 - graphviz ``` @@ -40,9 +39,9 @@ Make sure that channel priority is set to flexible using the following comments: ```bash # print your current conda settings -mamba config --describe channel_priority +conda config --describe channel_priority # set to flexible if not already done -mamba config --set channel_priority flexible +conda config --set channel_priority flexible ``` 3. Create the _Nextflow_ `mamba` environment