From 606e9ca6f932a9e3070bb4e58c515b8a4eebaf1f Mon Sep 17 00:00:00 2001
From: Qi Yu <yuq3@hpc.nih.gov>
Date: Fri, 12 Jun 2026 12:30:27 -0400
Subject: [PATCH] 50G lscratch is not big enough for omics pipelines, so start
 with 100GB instead.

---
 conf/biowulf.config | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf/biowulf.config b/conf/biowulf.config
index d6d64b7f5..36b3116a6 100644
--- a/conf/biowulf.config
+++ b/conf/biowulf.config
@@ -43,7 +43,7 @@ process {
     executor       = 'slurm'
     maxRetries     = 2
     resourceLimits = [ cpus: 192, memory: 751.GB, time: 240.h ]
-    clusterOptions = { "--gres=lscratch:${50 * task.attempt}" }
+    clusterOptions = { "--gres=lscratch:${100 * task.attempt}" }
     scratch        = '/lscratch/$SLURM_JOB_ID'
     stageInMode    = 'symlink'
     stageOutMode   = 'rsync'