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Haplotyper: ignore dict validation #253

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matthdsm opened this issue Jan 21, 2025 · 1 comment
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Haplotyper: ignore dict validation #253

matthdsm opened this issue Jan 21, 2025 · 1 comment
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enhancement New feature or request

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@matthdsm
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Description of feature

Add a flag to enable '--disable-sequence-dictionary-validation true' for GATK Haplotypecaller and add it to the seqplorer profile.
This enables the use of "old" data with a different sequence dictionary
@matthdsm matthdsm added the enhancement New feature or request label Jan 21, 2025
@nvnieuwk
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Added in 1.9.2!

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@matthdsm @nvnieuwk