Question about the setup of embryoid data

[Huang-XN]

Hi @necludov ,
it is a great work.

I am going to try it with my own single cell data. But I have some questions about it.
In the article, you have applied eAM to embryoid data. I would like to know how you preprocessed this dataset.

This would help me.

If possible, I wish you could provide the data you used in the article.

Thank you
Huang

[necludov]

Hi @Huang-XN,

Thank you so much! For the single-cell experiments, I used the data from this repository https://github.com/take-koshizuka/nlsb.

Best,
Kirill

[Huang-XN]

Hi @necludov,

Thank you very much!

I will try it with example dataset first, then my own dataset.

Best,
Huang