Reading ccp4 maps works only for some axis orders.
It's because C,R,S to X,Y,Z mapping is used instead of the opposite (X,Y,Z to C,R,S).
So it works if axis order is for instance XYZ, ZYX or YXZ, but it doesn't work with YZX, etc.
If you'd like to test it, the axes can be reordered using ccp4 mapmask:
mapmask mapin 1mru_2mFo-DFc.ccp4 mapout 1mru_yzx.ccp4 << eof
AXIS Y Z X
MODE mapin
eof
I'm opening this issue just for the record.
I made a fork of the viewer that looks like coot (it diverged from xtal.js quite far by now):
https://github.com/uglymol/uglymol
and I fixed it there.
Reading ccp4 maps works only for some axis orders.
It's because C,R,S to X,Y,Z mapping is used instead of the opposite (X,Y,Z to C,R,S).
So it works if axis order is for instance XYZ, ZYX or YXZ, but it doesn't work with YZX, etc.
If you'd like to test it, the axes can be reordered using ccp4 mapmask:
I'm opening this issue just for the record.
I made a fork of the viewer that looks like coot (it diverged from xtal.js quite far by now):
https://github.com/uglymol/uglymol
and I fixed it there.