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Sep 18, 2024

fb4ebd8 · Sep 18, 2024

Name	Name	Last commit message	Last commit date
parent directory ..
20B	20B	Add ua node (#34 )	Nov 1, 2022
20C	20C	Add ua node (#34 )	Nov 1, 2022
20D_from_fasta	20D_from_fasta	Add ua node (#34 )	Nov 1, 2022
AY.103	AY.103	Add ua node (#34 )	Nov 1, 2022
B.1.1.529	B.1.1.529	Add ua node (#34 )	Nov 1, 2022
_ignore	_ignore	Dag io custom format (#83 )	Jun 13, 2024
big_test	big_test	Dag io custom format (#83 )	Jun 13, 2024
check_parsimony_protobuf	check_parsimony_protobuf	fix ComputeCompactGenomes and add check for unique leaf CGs and add m…	Sep 8, 2022
convert_and_clean_scripts	convert_and_clean_scripts	added fix to viral_dataset_snake for missing data codes that are not '-'	Jan 10, 2024
ebov_dud17	ebov_dud17	Added ebov_dud17 test	Dec 20, 2023
sample_dag	sample_dag	Conda packaging (#88 )	Sep 18, 2024
seedtree	seedtree	callback benchmarking scripts and optimized seedtree protobuf	Jun 22, 2023
startmat	startmat	Add ua node (#34 )	Nov 1, 2022
test_5_trees	test_5_trees	convert protobufs to new style	Mar 8, 2024
test_ambiguous_vcf	test_ambiguous_vcf	removed unnecessary (and corrupted) pbs	Mar 11, 2024
testcase	testcase	convert protobufs to new style	Mar 8, 2024
testcase1	testcase1	convert protobufs to new style	Mar 8, 2024
testcase2	testcase2	more pb fixes pushed	Mar 11, 2024
testcaseref	testcaseref	more pb fixes pushed	Mar 11, 2024
MakeSampleDAG_vcf.vcf	MakeSampleDAG_vcf.vcf	Parallel fragment merging (#58 )	Jun 15, 2023
new_samples.vcf	new_samples.vcf	Parallel fragment merging (#58 )	Jun 15, 2023