diff --git a/emmet-core/requirements/ubuntu-latest_py3.11.txt b/emmet-core/requirements/ubuntu-latest_py3.11.txt
index 85516b55e5..49429941b2 100644
--- a/emmet-core/requirements/ubuntu-latest_py3.11.txt
+++ b/emmet-core/requirements/ubuntu-latest_py3.11.txt
@@ -6,7 +6,7 @@
 #
 annotated-types==0.7.0
     # via pydantic
-certifi==2024.6.2
+certifi==2024.7.4
     # via requests
 charset-normalizer==3.3.2
     # via requests
@@ -14,7 +14,7 @@ contourpy==1.2.1
     # via matplotlib
 cycler==0.12.1
     # via matplotlib
-fonttools==4.53.0
+fonttools==4.53.1
     # via matplotlib
 idna==3.7
     # via requests
@@ -24,9 +24,9 @@ kiwisolver==1.4.5
     # via matplotlib
 latexcodec==3.0.0
     # via pybtex
-matplotlib==3.9.0
+matplotlib==3.9.1
     # via pymatgen
-monty==2024.5.24
+monty==2024.7.12
     # via
     #   emmet-core (setup.py)
     #   pymatgen
@@ -53,21 +53,21 @@ pandas==2.2.2
     # via pymatgen
 pillow==10.4.0
     # via matplotlib
-plotly==5.22.0
+plotly==5.23.0
     # via pymatgen
 pybtex==0.24.0
     # via
     #   emmet-core (setup.py)
     #   pymatgen
-pydantic==2.8.0
+pydantic==2.8.2
     # via
     #   emmet-core (setup.py)
     #   pydantic-settings
-pydantic-core==2.20.0
+pydantic-core==2.20.1
     # via pydantic
 pydantic-settings==2.3.4
     # via emmet-core (setup.py)
-pymatgen==2024.4.13
+pymatgen==2024.7.18
     # via emmet-core (setup.py)
 pyparsing==3.1.2
     # via matplotlib
@@ -93,13 +93,13 @@ six==1.16.0
     # via
     #   pybtex
     #   python-dateutil
-spglib==2.4.0
+spglib==2.5.0
     # via pymatgen
-sympy==1.12.1
+sympy==1.13.1
     # via pymatgen
 tabulate==0.9.0
     # via pymatgen
-tenacity==8.4.2
+tenacity==8.5.0
     # via plotly
 tqdm==4.66.4
     # via pymatgen
@@ -110,7 +110,7 @@ typing-extensions==4.12.2
     #   pydantic-core
 tzdata==2024.1
     # via pandas
-uncertainties==3.2.1
+uncertainties==3.2.2
     # via pymatgen
 urllib3==2.2.2
     # via requests
diff --git a/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt b/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
index 615b1b7bc4..da6a43637b 100644
--- a/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
+++ b/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
@@ -17,23 +17,24 @@ ase==3.23.0
     #   chgnet
     #   matcalc
     #   matgl
+    #   pymatgen-analysis-diffusion
 attrs==23.2.0
     # via
     #   aiohttp
     #   jsonlines
     #   jsonschema
     #   referencing
-bcrypt==4.1.3
+bcrypt==4.2.0
     # via paramiko
-boto3==1.34.137
+boto3==1.34.146
     # via maggma
-botocore==1.34.137
+botocore==1.34.146
     # via
     #   boto3
     #   s3transfer
 bracex==2.4
     # via wcmatch
-certifi==2024.6.2
+certifi==2024.7.4
     # via requests
 cffi==1.16.0
     # via
@@ -53,9 +54,9 @@ colorama==0.4.6
     # via griffe
 contourpy==1.2.1
     # via matplotlib
-coverage[toml]==7.5.4
+coverage[toml]==7.6.0
     # via pytest-cov
-cryptography==42.0.8
+cryptography==43.0.0
     # via paramiko
 csscompressor==0.9.5
     # via mkdocs-minify-plugin
@@ -73,7 +74,7 @@ dnspython==2.6.1
     # via
     #   maggma
     #   pymongo
-emmet-core==0.84.1
+emmet-core==0.83.6
     # via mp-api
 fasteners==0.19
     # via mdanalysis
@@ -84,7 +85,7 @@ filelock==3.15.4
     #   virtualenv
 flake8==7.1.0
     # via emmet-core (setup.py)
-fonttools==4.53.0
+fonttools==4.53.1
     # via matplotlib
 frozenlist==1.4.1
     # via
@@ -99,13 +100,13 @@ ghp-import==2.1.0
     # via mkdocs
 griddataformats==1.0.2
     # via mdanalysis
-griffe==0.47.0
+griffe==0.48.0
     # via mkdocstrings-python
 h5py==3.11.0
     # via phonopy
 htmlmin2==0.1.13
     # via mkdocs-minify-plugin
-identify==2.5.36
+identify==2.6.0
     # via pre-commit
 idna==3.7
     # via
@@ -113,7 +114,7 @@ idna==3.7
     #   yarl
 imageio==2.34.2
     # via scikit-image
-inflect==7.3.0
+inflect==7.3.1
     # via robocrys
 iniconfig==2.0.0
     # via pytest
@@ -139,7 +140,7 @@ jsmin==3.0.1
     # via mkdocs-minify-plugin
 jsonlines==4.0.0
     # via maggma
-jsonschema==4.22.0
+jsonschema==4.23.0
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -149,9 +150,9 @@ latexcodec==3.0.0
     # via pybtex
 lazy-loader==0.4
     # via scikit-image
-lightning==2.3.1
+lightning==2.3.3
     # via matgl
-lightning-utilities==0.11.3.post0
+lightning-utilities==0.11.6
     # via
     #   lightning
     #   pytorch-lightning
@@ -179,12 +180,13 @@ matgl==1.1.2
     # via emmet-core (setup.py)
 matminer==0.9.2
     # via robocrys
-matplotlib==3.9.0
+matplotlib==3.9.1
     # via
     #   ase
     #   mdanalysis
     #   phonopy
     #   pymatgen
+    #   seaborn
     #   solvation-analysis
 mccabe==0.7.0
     # via flake8
@@ -233,7 +235,7 @@ mmtf-python==1.1.3
     # via mdanalysis
 mongomock==4.1.2
     # via maggma
-monty==2024.5.24
+monty==2024.7.12
     # via
     #   custodian
     #   emmet-core
@@ -251,7 +253,7 @@ mp-pyrho==0.4.4
     # via pymatgen-analysis-defects
 mpmath==1.3.0
     # via sympy
-mrcfile==1.5.0
+mrcfile==1.5.2
     # via griddataformats
 msgpack==1.0.8
     # via
@@ -262,7 +264,7 @@ multidict==6.0.5
     # via
     #   aiohttp
     #   yarl
-mypy==1.10.1
+mypy==1.11.0
     # via emmet-core (setup.py)
 mypy-extensions==1.0.0
     # via
@@ -285,7 +287,6 @@ numpy==1.26.4
     #   chgnet
     #   contourpy
     #   dgl
-    #   emmet-core
     #   emmet-core (setup.py)
     #   griddataformats
     #   h5py
@@ -301,12 +302,14 @@ numpy==1.26.4
     #   phonopy
     #   pymatgen
     #   pymatgen-analysis-defects
+    #   pymatgen-analysis-diffusion
     #   pytorch-lightning
     #   rdkit
     #   robocrys
     #   scikit-image
     #   scikit-learn
     #   scipy
+    #   seaborn
     #   seekpath
     #   shapely
     #   solvation-analysis
@@ -347,7 +350,7 @@ nvidia-nvjitlink-cu12==12.5.82
     #   nvidia-cusparse-cu12
 nvidia-nvtx-cu12==12.1.105
     # via torch
-orjson==3.10.5
+orjson==3.10.6
     # via maggma
 packaging==24.1
     # via
@@ -371,6 +374,7 @@ pandas==2.2.2
     #   maggma
     #   matminer
     #   pymatgen
+    #   seaborn
     #   solvation-analysis
     #   statsmodels
 paramiko==3.4.0
@@ -379,7 +383,7 @@ pathspec==0.12.1
     # via mkdocs
 patsy==0.5.6
     # via statsmodels
-phonopy==2.25.0
+phonopy==2.26.6
     # via matcalc
 pillow==10.4.0
     # via
@@ -392,7 +396,7 @@ platformdirs==4.2.2
     #   mkdocs-get-deps
     #   mkdocstrings
     #   virtualenv
-plotly==5.22.0
+plotly==5.23.0
     # via
     #   pymatgen
     #   solvation-analysis
@@ -418,21 +422,21 @@ pycodestyle==2.12.0
     #   flake8
 pycparser==2.22
     # via cffi
-pydantic==2.8.0
+pydantic==2.8.2
     # via
     #   emmet-core
     #   emmet-core (setup.py)
     #   maggma
     #   matgl
     #   pydantic-settings
-pydantic-core==2.20.0
+pydantic-core==2.20.1
     # via pydantic
 pydantic-settings==2.3.4
     # via
     #   emmet-core
     #   emmet-core (setup.py)
     #   maggma
-pydash==8.0.1
+pydash==8.0.3
     # via maggma
 pydocstyle==6.3.0
     # via emmet-core (setup.py)
@@ -440,7 +444,7 @@ pyflakes==3.2.0
     # via flake8
 pygments==2.18.0
     # via mkdocs-material
-pymatgen==2024.4.13
+pymatgen==2024.7.18
     # via
     #   chgnet
     #   emmet-core
@@ -456,9 +460,9 @@ pymatgen==2024.4.13
     #   robocrys
 pymatgen-analysis-alloys==0.0.6
     # via emmet-core (setup.py)
-pymatgen-analysis-defects==2024.5.11
+pymatgen-analysis-defects==2024.7.19
     # via emmet-core (setup.py)
-pymatgen-analysis-diffusion==2023.8.15
+pymatgen-analysis-diffusion==2024.7.15
     # via emmet-core (setup.py)
 pymdown-extensions==10.8.1
     # via
@@ -472,7 +476,7 @@ pynacl==1.5.0
     # via paramiko
 pyparsing==3.1.2
     # via matplotlib
-pytest==8.2.2
+pytest==8.3.1
     # via
     #   emmet-core (setup.py)
     #   pytest-cov
@@ -488,7 +492,7 @@ python-dateutil==2.9.0.post0
     #   pandas
 python-dotenv==1.0.1
     # via pydantic-settings
-pytorch-lightning==2.3.1
+pytorch-lightning==2.3.3
     # via lightning
 pytz==2024.1
     # via pandas
@@ -508,7 +512,7 @@ pyyaml-env-tag==0.1
     # via mkdocs
 pyzmq==26.0.3
     # via maggma
-rdkit==2024.3.1
+rdkit==2024.3.3
     # via solvation-analysis
 referencing==0.35.1
     # via
@@ -523,7 +527,7 @@ requests==2.32.3
     #   torchdata
 robocrys==0.2.9
     # via emmet-core (setup.py)
-rpds-py==0.18.1
+rpds-py==0.19.0
     # via
     #   jsonschema
     #   referencing
@@ -539,9 +543,9 @@ s3transfer==0.10.2
     # via boto3
 scikit-image==0.24.0
     # via pymatgen-analysis-defects
-scikit-learn==1.5.0
+scikit-learn==1.5.1
     # via matminer
-scipy==1.12.0
+scipy==1.14.0
     # via
     #   ase
     #   dgl
@@ -553,11 +557,13 @@ scipy==1.12.0
     #   scikit-learn
     #   solvation-analysis
     #   statsmodels
+seaborn==0.13.2
+    # via pymatgen-analysis-diffusion
 seekpath==2.1.0
     # via emmet-core (setup.py)
 sentinels==1.0.0
     # via mongomock
-shapely==2.0.4
+shapely==2.0.5
     # via pymatgen-analysis-alloys
 six==1.16.0
     # via
@@ -568,9 +574,9 @@ smart-open==7.0.4
     # via mp-api
 snowballstemmer==2.2.0
     # via pydocstyle
-solvation-analysis==0.4.0
+solvation-analysis==0.4.1
     # via emmet-core (setup.py)
-spglib==2.4.0
+spglib==2.5.0
     # via
     #   phonopy
     #   pymatgen
@@ -580,20 +586,20 @@ sshtunnel==0.4.0
     # via maggma
 statsmodels==0.14.2
     # via solvation-analysis
-sympy==1.12.1
+sympy==1.13.1
     # via
     #   matminer
     #   pymatgen
     #   torch
 tabulate==0.9.0
     # via pymatgen
-tenacity==8.4.2
+tenacity==8.5.0
     # via plotly
 threadpoolctl==3.5.0
     # via
     #   mdanalysis
     #   scikit-learn
-tifffile==2024.6.18
+tifffile==2024.7.21
     # via scikit-image
 torch==2.2.1
     # via
@@ -624,9 +630,9 @@ triton==2.2.0
     # via torch
 typeguard==4.3.0
     # via inflect
-types-requests==2.32.0.20240622
+types-requests==2.32.0.20240712
     # via emmet-core (setup.py)
-types-setuptools==70.1.0.20240627
+types-setuptools==71.1.0.20240723
     # via emmet-core (setup.py)
 typing-extensions==4.12.2
     # via
@@ -644,7 +650,7 @@ typing-extensions==4.12.2
     #   typeguard
 tzdata==2024.1
     # via pandas
-uncertainties==3.2.1
+uncertainties==3.2.2
     # via pymatgen
 urllib3==2.2.2
     # via